BLASTX nr result

ID: Atractylodes22_contig00038093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038093
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycin...   109   2e-38
ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   111   2e-38
gb|AFK35687.1| unknown [Medicago truncatula]                          110   5e-38
ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I an...   108   9e-38
ref|XP_003621619.1| DNA-directed RNA polymerases I and III subun...   108   3e-37

>ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycine max]
           gi|255630968|gb|ACU15848.1| unknown [Glycine max]
          Length = 107

 Score =  109 bits (272), Expect(2) = 2e-38
 Identities = 50/60 (83%), Positives = 54/60 (90%)
 Frame = -1

Query: 651 MEHGSYQDQSASTFSLADEDHTLANSLRFTLNQDPRVTLCGYSIPHPSEARVNIRVQTTG 472
           MEHGSY DQS STFSL DEDHT AN++RFTLNQDPRV+ CGYSIPHPS+ RVNIRVQTTG
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60



 Score = 76.3 bits (186), Expect(2) = 2e-38
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = -3

Query: 397 IRVQTTGDPANEVLKDSCQDLMLICQHVRSTFDQAVADFK 278
           IRVQTTGDP+ EVLKD+CQDLML+CQHVRSTFD+AV+DFK
Sbjct: 54  IRVQTTGDPSREVLKDACQDLMLMCQHVRSTFDKAVSDFK 93


>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  111 bits (278), Expect(2) = 2e-38
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = -1

Query: 651 MEHGSYQDQSASTFSLADEDHTLANSLRFTLNQDPRVTLCGYSIPHPSEARVNIRVQTTG 472
           MEHGS+ D S STFSL+DEDHTLANS+RFTLNQDPRV  CGYSIPHPS+ARVNIRVQTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60



 Score = 73.6 bits (179), Expect(2) = 2e-38
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = -3

Query: 397 IRVQTTGDPANEVLKDSCQDLMLICQHVRSTFDQAVADFKNN*HAERPVK 248
           IRVQTTGD A EVLKD+CQDLML+CQHVRSTFD+AV D+K      +PVK
Sbjct: 54  IRVQTTGDSAREVLKDACQDLMLMCQHVRSTFDKAVVDYK----MSKPVK 99


>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  110 bits (275), Expect(2) = 5e-38
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = -1

Query: 651 MEHGSYQDQSASTFSLADEDHTLANSLRFTLNQDPRVTLCGYSIPHPSEARVNIRVQTTG 472
           MEHGSY D S STFSL DEDHT ANS+RFTLNQDPRVT CGYSIPHPSE RVN+RVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60



 Score = 73.6 bits (179), Expect(2) = 5e-38
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = -3

Query: 397 IRVQTTGDPANEVLKDSCQDLMLICQHVRSTFDQAVADFKNN 272
           +RVQTTGDPA+EVLKD CQDLML+CQHVRSTF +AV DFK +
Sbjct: 54  VRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTS 95


>ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Glycine max]
          Length = 106

 Score =  108 bits (269), Expect(2) = 9e-38
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = -1

Query: 651 MEHGSYQDQSASTFSLADEDHTLANSLRFTLNQDPRVTLCGYSIPHPSEARVNIRVQTTG 472
           ME GSY DQS STFSL DEDHT ANS+RFTLNQDPRVT CGYSIPHPS+ RVNIRVQTTG
Sbjct: 1   MELGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60



 Score = 75.1 bits (183), Expect(2) = 9e-38
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -3

Query: 397 IRVQTTGDPANEVLKDSCQDLMLICQHVRSTFDQAVADFK 278
           IRVQTTGDPA EVLKD CQDLML+CQHVRSTFD A+ DFK
Sbjct: 54  IRVQTTGDPAREVLKDGCQDLMLMCQHVRSTFDNAMTDFK 93


>ref|XP_003621619.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355496634|gb|AES77837.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 115

 Score =  108 bits (269), Expect(2) = 3e-37
 Identities = 50/60 (83%), Positives = 52/60 (86%)
 Frame = -1

Query: 651 MEHGSYQDQSASTFSLADEDHTLANSLRFTLNQDPRVTLCGYSIPHPSEARVNIRVQTTG 472
           MEHGSY D S STFSL DEDHT ANS+RF LNQDPRVT CGYSIPHPSE RVN+RVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFILNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60



 Score = 73.6 bits (179), Expect(2) = 3e-37
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = -3

Query: 397 IRVQTTGDPANEVLKDSCQDLMLICQHVRSTFDQAVADFKNN 272
           +RVQTTGDPA+EVLKD CQDLML+CQHVRSTF +AV DFK +
Sbjct: 54  VRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTS 95


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