BLASTX nr result

ID: Atractylodes22_contig00038075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038075
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]               96   2e-18
ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                   89   4e-16
gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]        88   6e-16
ref|XP_002890644.1| hypothetical protein ARALYDRAFT_472732 [Arab...    87   1e-15

>gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]
          Length = 132

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/54 (79%), Positives = 47/54 (87%), Gaps = 1/54 (1%)
 Frame = -1

Query: 314 KKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLR-DPDGPNGST 156
           KK SPHKRGIRNGPKALKP+PVIIRCK CGRVKLPHFFCCSG++ +P   N ST
Sbjct: 78  KKVSPHKRGIRNGPKALKPVPVIIRCKACGRVKLPHFFCCSGIKQNPGEENNST 131


>ref|XP_002311319.1| predicted protein [Populus trichocarpa] gi|222851139|gb|EEE88686.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -1

Query: 314 KKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLRDPDG 171
           +K +PHKRGIRNGPKALKPIPVIIRCK CG+VKLPHF+CCSG R  +G
Sbjct: 87  RKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLPHFYCCSGDRGKNG 134


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -1

Query: 314 KKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLRDPDG 171
           +K +PHKRGIRNGPKALKPIPVIIRCK CG+VKLPHF+CCSG R  +G
Sbjct: 87  RKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLPHFYCCSGDRGKNG 134


>gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]
          Length = 139

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/48 (79%), Positives = 41/48 (85%)
 Frame = -1

Query: 314 KKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLRDPDG 171
           KK SPHKRGIRNGPKALKP PVIIRC+ CGR+KLPHF+CCSG R   G
Sbjct: 88  KKVSPHKRGIRNGPKALKPTPVIIRCRSCGRIKLPHFYCCSGDRGKAG 135


>ref|XP_002890644.1| hypothetical protein ARALYDRAFT_472732 [Arabidopsis lyrata subsp.
           lyrata] gi|297336486|gb|EFH66903.1| hypothetical protein
           ARALYDRAFT_472732 [Arabidopsis lyrata subsp. lyrata]
          Length = 134

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/44 (86%), Positives = 40/44 (90%)
 Frame = -1

Query: 314 KKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLR 183
           KK S HKRGIRNGPKALKP+PVIIRC+ CGRVKLPHFFCCSG R
Sbjct: 86  KKISKHKRGIRNGPKALKPVPVIIRCRSCGRVKLPHFFCCSGER 129


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