BLASTX nr result

ID: Atractylodes22_contig00038074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038074
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002888721.1| predicted protein [Arabidopsis lyrata subsp....    63   2e-08
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                   63   3e-08
gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]        55   6e-06

>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
 Frame = +3

Query: 18  RMAFLRTSLESNVCRALTFKRCTHGITRSPLLDSSISQSAASPPLLLPEFERSVDTIDNR 197
           R+  L+ + E+N    L  ++ TH +  +P LD ++  S ASP   LPEF+ + DT +N 
Sbjct: 4   RLGMLKCAAEANNGCRLGIRKWTHVVAMAPPLDGALESSIASPQFTLPEFDANQDTSNN- 62

Query: 198 FASDFHIN------TGSMELMAVPKKKTSPH 272
            +SDF          GSMELMAVPK+K +PH
Sbjct: 63  -SSDFGFTFPGFSFGGSMELMAVPKRKVTPH 92


>ref|XP_002888721.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334562|gb|EFH64980.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 141

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
 Frame = +3

Query: 6   MAFSRMAFLRTSLESNVCRALTFKRCTHGITRSPLLDSSISQSAASPPLLLPEF-----E 170
           MA       R  +ES   R L F+   H  T SP L+ +I  S ASPPL+LPEF     +
Sbjct: 1   MALRLTTLKRAVVESR--RILEFRSFNHVSTISPPLNGAIDLSTASPPLVLPEFYQDLSD 58

Query: 171 RSVDTIDNRFASDFHINTGSMELMAVPKKKTSPH 272
            S+D  + RF        GSMELMAVPKKK S H
Sbjct: 59  SSIDDKNFRFCFPISFFGGSMELMAVPKKKISKH 92


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
 Frame = +3

Query: 18  RMAFLRTSLESNVCRALTFKRCTHGITRSPLLDSSISQSAASPPLLLPEFERSVDTIDNR 197
           R+  L+ + E N    L  ++ TH +  +P LD ++  S A+P   LPEF+ + DT  N 
Sbjct: 4   RLGMLKCAAEGNNGCRLGIRKWTHVVAMAPPLDGALESSIAAPQFTLPEFDANQDTSKN- 62

Query: 198 FASDFHIN------TGSMELMAVPKKKTSPH 272
            +SDF          GSMELMAVPK+K +PH
Sbjct: 63  -SSDFGFTFPGFSFGGSMELMAVPKRKVTPH 92


>gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]
          Length = 139

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
 Frame = +3

Query: 18  RMAFLRTSLESNVCRALTFKRCTHGITRSPLLDSSISQSAASPPLLLPEFERSVDTIDNR 197
           R+  L+T++    C  L+  R  H  +    LD S+ ++ A P ++LPEF+ + D +++ 
Sbjct: 4   RIGMLKTAVGKYGC-TLSLLRWAHIASMPSPLDGSLQRTTAPPDMVLPEFDTNPDNVNSS 62

Query: 198 FASDFHINT------GSMELMAVPKKKTSPH 272
           + ++           GS+E+MAVPKKK SPH
Sbjct: 63  YRNNLEFGFPSFSFGGSIEVMAVPKKKVSPH 93


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