BLASTX nr result

ID: Atractylodes22_contig00038063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038063
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...    69   4e-10
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    69   5e-10
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    64   1e-08
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    61   8e-08
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    60   2e-07

>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = +3

Query: 3   KAADALSR----PDLECSVMGGPQWRQWEVIKQEVHADAVLGKIQEELMAGTAEHKGFSL 170
           K ADALSR    P+L  S++  P+W + + + +EVH D VL  I   L  G     GF+ 
Sbjct: 269 KGADALSRVHDSPELH-SLVHYPEWLEGKEVLEEVHKDEVLKGIISALQKGEPTKPGFAY 327

Query: 171 RQGLLCYKDRLVLSKTSSLLPIILEEFHGSP 263
           R+G+L Y+DRLVL+  S  +P +L EFH SP
Sbjct: 328 RRGVLFYEDRLVLAANSKWIPKLLLEFHSSP 358


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3    KAADALSR--PDLECSVMGGPQWRQWEVIKQEVHADAVLGKIQEELMAGTAE-HKGFSLR 173
            KAADALSR  P ++ S +  P      V+K+EV  D  L K+ +EL +G     + FS+R
Sbjct: 1940 KAADALSRVPPAVQLSSLTAPALIDLLVVKKEVEEDIRLRKVWDELQSGEENTERKFSIR 1999

Query: 174  QGLLCYKDRLVLSKTSSLLPIILEEFHGS 260
             G+L YKDRLVLS++S+L+P IL  +H S
Sbjct: 2000 HGMLRYKDRLVLSQSSALIPAILYTYHDS 2028


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
 Frame = +3

Query: 3    KAADALSRPDLE---CSVMGGPQWRQWEVIKQEVHADAVLGKIQEELMAGTAEHKGFSLR 173
            K ADALSR   +   C  +   QW+  +++++E+  D+ L KI  +L    +   G+ L+
Sbjct: 784  KGADALSRVREDGELCQGITSVQWKDEKLLREELSRDSQLQKIIGDLQRDASSRPGYMLK 843

Query: 174  QGLLCYKDRLVLSKTSSLLPIILEEFHGSP 263
            QG+L Y+ RLV+S  S ++P +L EFH +P
Sbjct: 844  QGVLLYEGRLVVSSKSVMIPTLLAEFHSTP 873


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
 Frame = +3

Query: 3    KAADALSR--PDLECSVMGGPQWRQWEVIKQEVHADAVLGKIQEELMAGTAEHKGFSLRQ 176
            KAADALSR   + + + +  P     +V+++EV  D  L  I E+L+        +S++Q
Sbjct: 786  KAADALSRIPGEAQLNAIAVPSILDVKVVEKEVQEDDKLKDIFEQLLKDPDSIPRYSIKQ 845

Query: 177  GLLCYKDRLVLSKTSSLLPIILEEFH 254
            G L YK RLVL KTSSLLP IL  FH
Sbjct: 846  GRLFYKGRLVLPKTSSLLPTILHTFH 871


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
 Frame = +3

Query: 3    KAADALSR---PDLECSVMGGPQWRQWEVIKQEVHADAVLGKIQEELMAGTAEHKGFSLR 173
            K ADALSR   P+ E +++        E+I Q +  DA L  +  E+ AG    +GF++ 
Sbjct: 1025 KVADALSRKHPPEAEYNLLTSSHSPHQELIAQAIRQDADLQHLMAEVTAGRTPLQGFTVE 1084

Query: 174  QGLLCYKDRLVLSKTSSLLPIILEEFHGSP 263
             GLL Y  RLV+ K   L   +LEE+H SP
Sbjct: 1085 HGLLKYNGRLVIPKNVPLTTTLLEEYHSSP 1114


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