BLASTX nr result

ID: Atractylodes22_contig00038046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038046
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vi...    84   2e-14
emb|CBI40960.3| unnamed protein product [Vitis vinifera]               84   2e-14
emb|CBI38064.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vi...    80   2e-13
emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]    80   2e-13

>ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/129 (39%), Positives = 71/129 (55%)
 Frame = +3

Query: 3    RVLQVDRTAIKTLPDSIGXXXXXXXXXXXXXPGLVALPSNICNLRSLQELFVTSCSNLEQ 182
            R L +D TAIK LP S+                L+ LPS+ICNL+SL  L ++ CS LE+
Sbjct: 747  RELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSLSTLTLSGCSQLEK 806

Query: 183  LPLQLGNMECLRHLNVGGTAIKHLPDSIGLLKNLTILSVHENHRSLVTKSHFPLFQFLAL 362
            LP  LGN+ECL  L   G+A+   P SI LL+NL +LS    + S  ++ +   +  L L
Sbjct: 807  LPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSFQGCNGSPSSRWNSRFWSMLCL 866

Query: 363  PRSLNATSF 389
             R  ++T F
Sbjct: 867  RRISDSTGF 875


>emb|CBI40960.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/129 (39%), Positives = 71/129 (55%)
 Frame = +3

Query: 3   RVLQVDRTAIKTLPDSIGXXXXXXXXXXXXXPGLVALPSNICNLRSLQELFVTSCSNLEQ 182
           R L +D TAIK LP S+                L+ LPS+ICNL+SL  L ++ CS LE+
Sbjct: 253 RELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSLSTLTLSGCSQLEK 312

Query: 183 LPLQLGNMECLRHLNVGGTAIKHLPDSIGLLKNLTILSVHENHRSLVTKSHFPLFQFLAL 362
           LP  LGN+ECL  L   G+A+   P SI LL+NL +LS    + S  ++ +   +  L L
Sbjct: 313 LPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSFQGCNGSPSSRWNSRFWSMLCL 372

Query: 363 PRSLNATSF 389
            R  ++T F
Sbjct: 373 RRISDSTGF 381



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 39/108 (36%), Positives = 53/108 (49%)
 Frame = +3

Query: 9   LQVDRTAIKTLPDSIGXXXXXXXXXXXXXPGLVALPSNICNLRSLQELFVTSCSNLEQLP 188
           L ++ TAI  LP SIG                 +LP  I  L+SL+ L ++ C+  E  P
Sbjct: 184 LHLNGTAITELPSSIGYATQLVSLDMEDCKRFKSLPCCIYKLKSLKILKLSGCAKFESFP 243

Query: 189 LQLGNMECLRHLNVGGTAIKHLPDSIGLLKNLTILSVHENHRSLVTKS 332
             L NME LR L + GTAIK LP S+  L  L +L++    R +   S
Sbjct: 244 EILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPS 291


>emb|CBI38064.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/99 (42%), Positives = 60/99 (60%)
 Frame = +3

Query: 3   RVLQVDRTAIKTLPDSIGXXXXXXXXXXXXXPGLVALPSNICNLRSLQELFVTSCSNLEQ 182
           R L +D TA++ LP SIG               LV+LP ++C L SLQ L +  CS L++
Sbjct: 324 RQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKK 383

Query: 183 LPLQLGNMECLRHLNVGGTAIKHLPDSIGLLKNLTILSV 299
           LP +LG++ CL +LN  G+ I+ +P SI LL NL +LS+
Sbjct: 384 LPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSL 422


>ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/99 (42%), Positives = 60/99 (60%)
 Frame = +3

Query: 3    RVLQVDRTAIKTLPDSIGXXXXXXXXXXXXXPGLVALPSNICNLRSLQELFVTSCSNLEQ 182
            R L +D TA++ LP SIG               LV+LP ++C L SLQ L +  CS L++
Sbjct: 725  RQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKK 784

Query: 183  LPLQLGNMECLRHLNVGGTAIKHLPDSIGLLKNLTILSV 299
            LP +LG++ CL +LN  G+ I+ +P SI LL NL +LS+
Sbjct: 785  LPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSL 823


>emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]
          Length = 1206

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/99 (42%), Positives = 60/99 (60%)
 Frame = +3

Query: 3    RVLQVDRTAIKTLPDSIGXXXXXXXXXXXXXPGLVALPSNICNLRSLQELFVTSCSNLEQ 182
            R L +D TA++ LP SIG               LV+LP ++C L SLQ L +  CS L++
Sbjct: 766  RQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKK 825

Query: 183  LPLQLGNMECLRHLNVGGTAIKHLPDSIGLLKNLTILSV 299
            LP +LG++ CL +LN  G+ I+ +P SI LL NL +LS+
Sbjct: 826  LPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSL 864


Top