BLASTX nr result
ID: Atractylodes22_contig00038020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00038020
(582 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-... 298 6e-79
emb|CBI28088.3| unnamed protein product [Vitis vinifera] 293 2e-77
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera] 282 3e-74
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative... 281 6e-74
ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 280 1e-73
>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
Length = 1122
Score = 298 bits (762), Expect = 6e-79
Identities = 142/194 (73%), Positives = 163/194 (84%)
Frame = +1
Query: 1 FKGSSNTWDCALNGVVHQEIAFCALGALTSHLSRLKLDDALRNGSILPYEVYRGCLRMDG 180
FKGS N+WD AL+GV+H ++A CALG L HLSRLKLDD LRNG ILPY+VY GCLRMDG
Sbjct: 506 FKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVYSGCLRMDG 565
Query: 181 QTMANLEIFSNNVDGGTSGTLYKYLDNCITSSGKRLLRKWLCHPLKDAEEINRRLNVVEE 360
QT+ NLEIFSNN DGG+SGTLYKYLDNC+TSSGKRLLR W+CHPLKD + IN RLNVVE
Sbjct: 566 QTLVNLEIFSNNADGGSSGTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVVEH 625
Query: 361 LMAHAEIMALIAQYLRKLPDLERFLGQIRATSQSSTLIILPLIGSKILKQRVKVFGSLVK 540
LM + E M+ IAQ LRKLPDLER LGQ++A+ QSS L++LP G K+LKQRVKVFG LVK
Sbjct: 626 LMTNTETMSFIAQCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGLLVK 685
Query: 541 GLRVGMDLLMLLQK 582
GLRV +DLL+ LQK
Sbjct: 686 GLRVAIDLLVQLQK 699
>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
Length = 1126
Score = 293 bits (749), Expect = 2e-77
Identities = 142/196 (72%), Positives = 163/196 (83%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FKGSSNTWDCALNGVVHQEIAFCALGALTSHLSRLKLDDALRNGSILPYEVYRGCLRMDG 180
FKGS N+WD AL+GV+H ++A CALG L HLSRLKLDD LRNG ILPY+VY GCLRMDG
Sbjct: 508 FKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVYSGCLRMDG 567
Query: 181 QTMANLEIFSNNVDGGTSG--TLYKYLDNCITSSGKRLLRKWLCHPLKDAEEINRRLNVV 354
QT+ NLEIFSNN DGG+SG TLYKYLDNC+TSSGKRLLR W+CHPLKD + IN RLNVV
Sbjct: 568 QTLVNLEIFSNNADGGSSGKCTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVV 627
Query: 355 EELMAHAEIMALIAQYLRKLPDLERFLGQIRATSQSSTLIILPLIGSKILKQRVKVFGSL 534
E LM + E M+ IAQ LRKLPDLER LGQ++A+ QSS L++LP G K+LKQRVKVFG L
Sbjct: 628 EHLMTNTETMSFIAQCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGLL 687
Query: 535 VKGLRVGMDLLMLLQK 582
VKGLRV +DLL+ LQK
Sbjct: 688 VKGLRVAIDLLVQLQK 703
>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
Length = 1090
Score = 282 bits (722), Expect = 3e-74
Identities = 138/194 (71%), Positives = 157/194 (80%)
Frame = +1
Query: 1 FKGSSNTWDCALNGVVHQEIAFCALGALTSHLSRLKLDDALRNGSILPYEVYRGCLRMDG 180
FKGS N+WD AL+GV+H ++A CALG L HLSRLKLDD LRNG ILPY+VY GCLRMDG
Sbjct: 478 FKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVYSGCLRMDG 537
Query: 181 QTMANLEIFSNNVDGGTSGTLYKYLDNCITSSGKRLLRKWLCHPLKDAEEINRRLNVVEE 360
QT+ NLEIFSNN DG TLYKYLDNC+TSSGKRLLR W+CHPLKD + IN RLNVVE
Sbjct: 538 QTLVNLEIFSNNADG----TLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVVEH 593
Query: 361 LMAHAEIMALIAQYLRKLPDLERFLGQIRATSQSSTLIILPLIGSKILKQRVKVFGSLVK 540
LM E M+ IAQ LRKLPDLER LGQ++A+ QSS L++LP G K+LKQRVKVFG LVK
Sbjct: 594 LMTXTETMSFIAQCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGLLVK 653
Query: 541 GLRVGMDLLMLLQK 582
GLRV + LL+ LQK
Sbjct: 654 GLRVAIXLLVXLQK 667
>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
MSH6-2, putative [Ricinus communis]
Length = 1089
Score = 281 bits (719), Expect = 6e-74
Identities = 130/194 (67%), Positives = 162/194 (83%)
Frame = +1
Query: 1 FKGSSNTWDCALNGVVHQEIAFCALGALTSHLSRLKLDDALRNGSILPYEVYRGCLRMDG 180
F+GSS+ W+ + ++H +I ALG L HLSRL LDD LRNG ILPY+VY GCLRMDG
Sbjct: 484 FRGSSSPWNNVFDSIMHHDITLNALGTLVDHLSRLMLDDVLRNGDILPYQVYSGCLRMDG 543
Query: 181 QTMANLEIFSNNVDGGTSGTLYKYLDNCITSSGKRLLRKWLCHPLKDAEEINRRLNVVEE 360
QT+ NLEIF+NN DGG SGTL+ YLDNC+TSSGKRLLRKW+CHPLK E IN RLNVVE+
Sbjct: 544 QTLINLEIFNNNSDGGLSGTLFNYLDNCVTSSGKRLLRKWMCHPLKSVEGINNRLNVVED 603
Query: 361 LMAHAEIMALIAQYLRKLPDLERFLGQIRATSQSSTLIILPLIGSKILKQRVKVFGSLVK 540
LM ++IM +I+QYLRK+PD+ER LG+++A+ Q+S ++LPLIG K+L+QRVKVFGSLVK
Sbjct: 604 LMTQSDIMLVISQYLRKIPDIERMLGRVKASFQASASLVLPLIGKKVLRQRVKVFGSLVK 663
Query: 541 GLRVGMDLLMLLQK 582
GLR+G+DLL+LLQK
Sbjct: 664 GLRIGIDLLLLLQK 677
>ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH7-like
[Cucumis sativus]
Length = 1095
Score = 280 bits (716), Expect = 1e-73
Identities = 139/195 (71%), Positives = 159/195 (81%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FKGSSNTWDCALNGVVHQEIAFCALGALTSHLSRLKLDDALRNGSILPYEVYRGCLRMDG 180
FKGS N W+ VH +IA CALG L +H+SRL LDD LRNG +LPY+VYRGCLRMDG
Sbjct: 499 FKGSLNLWNH--ESTVHDDIALCALGGLINHMSRLMLDDVLRNGDLLPYQVYRGCLRMDG 556
Query: 181 QTMANLEIFSNNVDGGTSGTLYKYLDNCITSSGKRLLRKWLCHPLKDAEEINRRLNVVEE 360
QTM NLEIF NN DGG SGTLYKYLDNC+TSSGKRLLR W+CHPLKD EEIN RLNVVEE
Sbjct: 557 QTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRLNVVEE 616
Query: 361 LMAHAEIMALI-AQYLRKLPDLERFLGQIRATSQSSTLIILPLIGSKILKQRVKVFGSLV 537
LMA ++IM L+ YLRKLPDLER LGQI+AT QSS ++LPLI K+ K+RVK+FGSLV
Sbjct: 617 LMAQSDIMVLLGTTYLRKLPDLERLLGQIKATVQSSASLVLPLIRKKLQKRRVKLFGSLV 676
Query: 538 KGLRVGMDLLMLLQK 582
KGLR G+DLL+ +QK
Sbjct: 677 KGLRTGLDLLIQVQK 691