BLASTX nr result

ID: Atractylodes22_contig00037919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037919
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312122.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
gb|ABK92457.1| unknown [Populus trichocarpa]                           75   7e-12
ref|XP_002323527.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002315196.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
gb|ACF84643.1| unknown [Zea mays] gi|194708578|gb|ACF88373.1| un...    72   4e-11

>ref|XP_002312122.1| predicted protein [Populus trichocarpa] gi|222851942|gb|EEE89489.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/72 (59%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
 Frame = +3

Query: 126 MQTEATXXXXXXXXPA---HKLLSHHQRPVQLHRSQIGAVSQLIAGGVAGAVSKTCTAPL 296
           MQTEA         P     +   H     Q  +SQIG VSQL+AGGVAGA+SKTCTAPL
Sbjct: 1   MQTEARVGVVVEGGPRALNSQPKQHKPLQQQYQQSQIGTVSQLVAGGVAGALSKTCTAPL 60

Query: 297 ARLTILFQVQGM 332
           ARLTILFQVQGM
Sbjct: 61  ARLTILFQVQGM 72


>gb|ABK92457.1| unknown [Populus trichocarpa]
          Length = 267

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/72 (59%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
 Frame = +3

Query: 126 MQTEATXXXXXXXXPA---HKLLSHHQRPVQLHRSQIGAVSQLIAGGVAGAVSKTCTAPL 296
           MQTEA         P     +   H     Q  +SQIG VSQL+AGGVAGA+SKTCTAPL
Sbjct: 1   MQTEARVGVVVEGGPRALNSQPKQHKPLQQQYQQSQIGTVSQLVAGGVAGALSKTCTAPL 60

Query: 297 ARLTILFQVQGM 332
           ARLTILFQVQGM
Sbjct: 61  ARLTILFQVQGM 72


>ref|XP_002323527.1| predicted protein [Populus trichocarpa] gi|222868157|gb|EEF05288.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/54 (68%), Positives = 39/54 (72%)
 Frame = +3

Query: 171 AHKLLSHHQRPVQLHRSQIGAVSQLIAGGVAGAVSKTCTAPLARLTILFQVQGM 332
           A K L  H        SQ+G V QL+AGGVAGA SKTCTAPLARLTILFQVQGM
Sbjct: 32  ARKFLQQHNNKQSPQHSQLGTVQQLLAGGVAGAFSKTCTAPLARLTILFQVQGM 85


>ref|XP_002315196.1| predicted protein [Populus trichocarpa] gi|222864236|gb|EEF01367.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/72 (59%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
 Frame = +3

Query: 126 MQTEATXXXXXXXXPA---HKLLSHHQRPVQLHRSQIGAVSQLIAGGVAGAVSKTCTAPL 296
           MQTEA         P     +   H     Q  +SQIG VSQL+AGGVAGA+SKTCTAPL
Sbjct: 1   MQTEARVGVVVEGGPRALNSQPKQHKPLQQQHQQSQIGTVSQLVAGGVAGALSKTCTAPL 60

Query: 297 ARLTILFQVQGM 332
           ARLTILFQVQGM
Sbjct: 61  ARLTILFQVQGM 72


>gb|ACF84643.1| unknown [Zea mays] gi|194708578|gb|ACF88373.1| unknown [Zea mays]
           gi|413956208|gb|AFW88857.1| hypothetical protein
           ZEAMMB73_322976 [Zea mays]
          Length = 343

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/46 (76%), Positives = 40/46 (86%)
 Frame = +3

Query: 195 QRPVQLHRSQIGAVSQLIAGGVAGAVSKTCTAPLARLTILFQVQGM 332
           Q+ +Q H+ Q+G V  L+AGGVAGAVSKTCTAPLARLTILFQVQGM
Sbjct: 34  QQQLQHHQPQLGTVPHLLAGGVAGAVSKTCTAPLARLTILFQVQGM 79


Top