BLASTX nr result
ID: Atractylodes22_contig00037906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00037906
(502 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|2... 105 3e-21
ref|XP_002885157.1| pentatricopeptide repeat-containing protein ... 100 1e-19
ref|NP_188283.1| pentatricopeptide repeat-containing protein [Ar... 97 1e-18
ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containi... 86 3e-18
emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera] 86 3e-18
>ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|222872863|gb|EEF09994.1|
predicted protein [Populus trichocarpa]
Length = 799
Score = 105 bits (263), Expect = 3e-21
Identities = 51/109 (46%), Positives = 71/109 (65%)
Frame = -1
Query: 334 IKCYARKGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGC 155
I+ YA G Y E+IDLYY+M+ G +PN FTF FVL AC+ LK S+GR +H D+
Sbjct: 91 IRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRL 150
Query: 154 EDNEFVITALIDVYGKCGELGIARQLFDNMPMKKAPSCNALMAGFVLDE 8
E N +V TAL+D Y KCG L A+++FD M + + N++++GF L E
Sbjct: 151 ESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHE 199
Score = 65.1 bits (157), Expect = 6e-09
Identities = 35/105 (33%), Positives = 54/105 (51%)
Frame = -1
Query: 334 IKCYARKGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGC 155
I Y + G E + ++ EM SG +P T VLPACA L + G H ++ G
Sbjct: 398 ISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGF 457
Query: 154 EDNEFVITALIDVYGKCGELGIARQLFDNMPMKKAPSCNALMAGF 20
+ + ALID+Y KCG++ AR++FD M + S N ++ +
Sbjct: 458 TADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAY 502
Score = 53.1 bits (126), Expect(2) = 2e-08
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = -1
Query: 316 KGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGCEDNEFV 137
+G Y E L +M ++ SPN+ T VLPA A + + G+ +H + G + V
Sbjct: 199 EGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVV 257
Query: 136 ITALIDVYGKCGELGIARQLFDNMP-MKKAPSCNALMAGFVL 14
T ++DVYGKC + AR++FD M +K + +A++ +V+
Sbjct: 258 GTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVV 299
Score = 30.0 bits (66), Expect(2) = 2e-08
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -3
Query: 497 R*LHAQILKTRVSHNVFLLTRLAHAYLKFGCLNVGERFVVNVIKNPPLFLWN 342
R +H I + R+ NV++ T L Y K GCL+ + V + + + WN
Sbjct: 139 REIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKE-VFDKMHKRDVVAWN 189
>ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330997|gb|EFH61416.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 655
Score = 100 bits (249), Expect = 1e-19
Identities = 46/107 (42%), Positives = 68/107 (63%)
Frame = -1
Query: 334 IKCYARKGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGC 155
I+ Y G +++DLYY+M+ SG P FT+ FVL ACAGL+ + DG+ +H V
Sbjct: 75 IRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNF 134
Query: 154 EDNEFVITALIDVYGKCGELGIARQLFDNMPMKKAPSCNALMAGFVL 14
+ +V TAL+D Y KCGEL +A ++FD MP + + NA+++GF L
Sbjct: 135 AADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSL 181
Score = 63.9 bits (154), Expect = 1e-08
Identities = 32/94 (34%), Positives = 52/94 (55%)
Frame = -1
Query: 301 ESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGCEDNEFVITALI 122
ES L+++M SG P+ T +L AC+ L + G H ++ G N + AL+
Sbjct: 392 ESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALM 451
Query: 121 DVYGKCGELGIARQLFDNMPMKKAPSCNALMAGF 20
D+Y KCG+L +A+++FD M + S N ++ GF
Sbjct: 452 DMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGF 485
>ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g16610 gi|11994615|dbj|BAB02752.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 97.4 bits (241), Expect = 1e-18
Identities = 45/107 (42%), Positives = 68/107 (63%)
Frame = -1
Query: 334 IKCYARKGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGC 155
I+ YA +++DLYY+M+ SG P +T+ FVL ACAGL+ + DG+ +H V
Sbjct: 75 IRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDF 134
Query: 154 EDNEFVITALIDVYGKCGELGIARQLFDNMPMKKAPSCNALMAGFVL 14
+ +V TAL+D Y KCGEL +A ++FD MP + + NA+++GF L
Sbjct: 135 ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Score = 65.9 bits (159), Expect = 3e-09
Identities = 34/94 (36%), Positives = 52/94 (55%)
Frame = -1
Query: 301 ESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGCEDNEFVITALI 122
ES L++EM SG P+ T VL AC+ L + G H ++ G N + AL+
Sbjct: 392 ESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALM 451
Query: 121 DVYGKCGELGIARQLFDNMPMKKAPSCNALMAGF 20
D+Y KCG+L +A+++FD M + S N ++ GF
Sbjct: 452 DMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGF 485
>ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product
[Vitis vinifera]
Length = 697
Score = 85.5 bits (210), Expect(2) = 3e-18
Identities = 42/101 (41%), Positives = 65/101 (64%)
Frame = -1
Query: 322 ARKGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGCEDNE 143
A+ C+ E+ID++ EM+ + PNA T + VLPA A L L+ + VH + G E N
Sbjct: 98 AKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNV 157
Query: 142 FVITALIDVYGKCGELGIARQLFDNMPMKKAPSCNALMAGF 20
FV TAL+D+Y K G +G+ARQLF++M + + NA+++G+
Sbjct: 158 FVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGY 198
Score = 30.8 bits (68), Expect(2) = 3e-18
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 500 LR*LHAQILKTRVSHNVFLLTRLAHAYLKFGCL 402
L+ +HAQI+ + ++HN FL L +AY+ G L
Sbjct: 40 LQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLL 72
Score = 50.1 bits (118), Expect(2) = 1e-06
Identities = 27/102 (26%), Positives = 52/102 (50%)
Frame = -1
Query: 325 YARKGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGCEDN 146
Y+ G E+IDL+ M R G + +T ++PA + + G +H ++ G E++
Sbjct: 198 YSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND 257
Query: 145 EFVITALIDVYGKCGELGIARQLFDNMPMKKAPSCNALMAGF 20
+ + TAL+D+Y + A ++F M +K + ++ GF
Sbjct: 258 KHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGF 299
Score = 26.9 bits (58), Expect(2) = 1e-06
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 455 NVFLLTRLAHAYLKFGCLNVGER 387
NVF+ T L Y KFGC+ V +
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQ 178
>emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 85.5 bits (210), Expect(2) = 3e-18
Identities = 43/101 (42%), Positives = 64/101 (63%)
Frame = -1
Query: 322 ARKGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGCEDNE 143
A+ C+ E+ID++ EM + PNA T + VLPA A L L+ + VH + G E N
Sbjct: 98 AKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNV 157
Query: 142 FVITALIDVYGKCGELGIARQLFDNMPMKKAPSCNALMAGF 20
FV TAL+D+Y K G +G+ARQLF++M + S NA+++G+
Sbjct: 158 FVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGY 198
Score = 30.8 bits (68), Expect(2) = 3e-18
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 500 LR*LHAQILKTRVSHNVFLLTRLAHAYLKFGCL 402
L+ +HAQI+ + ++HN FL L +AY+ G L
Sbjct: 40 LQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLL 72
Score = 48.9 bits (115), Expect(2) = 3e-06
Identities = 27/102 (26%), Positives = 52/102 (50%)
Frame = -1
Query: 325 YARKGCYSESIDLYYEMVRSGYSPNAFTFTFVLPACAGLKLVSDGRRVHDDVLLFGCEDN 146
Y+ G E+IDL+ M R G + +T ++PA + + G +H ++ G E++
Sbjct: 198 YSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND 257
Query: 145 EFVITALIDVYGKCGELGIARQLFDNMPMKKAPSCNALMAGF 20
+ + TAL+D+Y + A ++F M +K + ++ GF
Sbjct: 258 KHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGF 299
Score = 26.9 bits (58), Expect(2) = 3e-06
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 455 NVFLLTRLAHAYLKFGCLNVGER 387
NVF+ T L Y KFGC+ V +
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQ 178