BLASTX nr result

ID: Atractylodes22_contig00037875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037875
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   179   7e-67
ref|XP_002305144.1| predicted protein [Populus trichocarpa] gi|2...   179   7e-67
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   177   8e-66
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   176   5e-65
ref|XP_003542754.1| PREDICTED: general transcription factor IIH ...   170   6e-64

>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  179 bits (454), Expect(2) = 7e-67
 Identities = 82/103 (79%), Positives = 93/103 (90%)
 Frame = +3

Query: 255 NGITADQIISFLQQNAHPRVAERVPSVPENVTDQIRLWESDLNRVEMTPAHFFDDFPSRD 434
           NGITA+QIISFLQQNAHPRVAER P+VPENVTDQIRLWE+DLNRVE  P+H +D+FPSRD
Sbjct: 349 NGITAEQIISFLQQNAHPRVAERTPAVPENVTDQIRLWETDLNRVETMPSHLYDEFPSRD 408

Query: 435 VFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAHMKDFLSHQK 563
           VFEAACDFAREYG LLWEDSKKMRL+VK EI+ HM+++L   K
Sbjct: 409 VFEAACDFAREYGGLLWEDSKKMRLVVKAEIHLHMREYLRRSK 451



 Score =  100 bits (250), Expect(2) = 7e-67
 Identities = 49/54 (90%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   TNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIV 162
           TNLS+SLSD SSRKQG+VVVETNFRLYAYS+SKLHCEILRLF+RVEYQLPNLIV
Sbjct: 282 TNLSMSLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILRLFSRVEYQLPNLIV 335


>ref|XP_002305144.1| predicted protein [Populus trichocarpa] gi|222848108|gb|EEE85655.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  179 bits (454), Expect(2) = 7e-67
 Identities = 82/103 (79%), Positives = 96/103 (93%)
 Frame = +3

Query: 255 NGITADQIISFLQQNAHPRVAERVPSVPENVTDQIRLWESDLNRVEMTPAHFFDDFPSRD 434
           NGIT+DQIISFLQQNAHPRVAER+PSVPENVTDQIRLWE+DLNRVE+TP+HF+D+FPSRD
Sbjct: 347 NGITSDQIISFLQQNAHPRVAERLPSVPENVTDQIRLWEADLNRVEITPSHFYDEFPSRD 406

Query: 435 VFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAHMKDFLSHQK 563
            FEAACDFARE+  LLWEDSKKMR++VK EI+ +M++FL  QK
Sbjct: 407 TFEAACDFAREWNGLLWEDSKKMRVVVKAEIHMNMREFLRGQK 449



 Score =  100 bits (250), Expect(2) = 7e-67
 Identities = 47/54 (87%), Positives = 54/54 (100%)
 Frame = +1

Query: 1   TNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIV 162
           TNLS+SL+D+SSRKQGYVVVETNFRLYAYS+SKLHCEILRLF+++EYQLPNLIV
Sbjct: 280 TNLSVSLTDSSSRKQGYVVVETNFRLYAYSSSKLHCEILRLFSKIEYQLPNLIV 333


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
           gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
           [Ricinus communis]
          Length = 451

 Score =  177 bits (448), Expect(2) = 8e-66
 Identities = 80/103 (77%), Positives = 96/103 (93%)
 Frame = +3

Query: 255 NGITADQIISFLQQNAHPRVAERVPSVPENVTDQIRLWESDLNRVEMTPAHFFDDFPSRD 434
           NGITA+QIISFLQQNAHPRVAER+PSVPENVTDQIRLWESD+NRVEMTPAH +D+FPSRD
Sbjct: 349 NGITAEQIISFLQQNAHPRVAERIPSVPENVTDQIRLWESDMNRVEMTPAHLYDEFPSRD 408

Query: 435 VFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAHMKDFLSHQK 563
           VFEAAC+FAR++  LLWEDSK+MR++VK EI+ +M+++L  QK
Sbjct: 409 VFEAACNFARDWNGLLWEDSKRMRMVVKAEIHLNMREYLRGQK 451



 Score = 99.8 bits (247), Expect(2) = 8e-66
 Identities = 46/54 (85%), Positives = 54/54 (100%)
 Frame = +1

Query: 1   TNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIV 162
           TNLS+SL+D+SSRKQG+VVVETNFR+YAYSTSKLHCEI+RLF+RVEYQLPNL+V
Sbjct: 282 TNLSMSLTDSSSRKQGFVVVETNFRMYAYSTSKLHCEIMRLFSRVEYQLPNLVV 335


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
           sativus]
          Length = 451

 Score =  176 bits (446), Expect(2) = 5e-65
 Identities = 78/103 (75%), Positives = 95/103 (92%)
 Frame = +3

Query: 255 NGITADQIISFLQQNAHPRVAERVPSVPENVTDQIRLWESDLNRVEMTPAHFFDDFPSRD 434
           NGITA+QI++FLQQNAHPRVAER+PSVPENVTDQIRLWESDLNRV++TPAHF+D+FPSR+
Sbjct: 349 NGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSRE 408

Query: 435 VFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAHMKDFLSHQK 563
           VFEAACD+ARE+  LLWEDSK +RL+VK +I+ HM++ L  QK
Sbjct: 409 VFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK 451



 Score = 97.8 bits (242), Expect(2) = 5e-65
 Identities = 46/54 (85%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   TNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIV 162
           TNLS+SL+D+SSRK G+VVVETNFR+YAYSTSKLHCEILRLF+R+EYQLPNLIV
Sbjct: 282 TNLSMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIV 335


>ref|XP_003542754.1| PREDICTED: general transcription factor IIH subunit 4-like [Glycine
           max]
          Length = 451

 Score =  170 bits (430), Expect(2) = 6e-64
 Identities = 76/103 (73%), Positives = 94/103 (91%)
 Frame = +3

Query: 255 NGITADQIISFLQQNAHPRVAERVPSVPENVTDQIRLWESDLNRVEMTPAHFFDDFPSRD 434
           NGITA+QII+FLQQNAHPRVAER+PSVPENVT+QIRLWE+DLNRVEMT A+++D+FPSRD
Sbjct: 349 NGITAEQIITFLQQNAHPRVAERIPSVPENVTEQIRLWEADLNRVEMTDAYYYDEFPSRD 408

Query: 435 VFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAHMKDFLSHQK 563
           VFE ACD ARE+  LLWEDSKKM ++VKTE++ +++D+L  QK
Sbjct: 409 VFEGACDCAREWNGLLWEDSKKMHMVVKTEVHQYVRDYLRRQK 451



 Score =  100 bits (249), Expect(2) = 6e-64
 Identities = 48/54 (88%), Positives = 54/54 (100%)
 Frame = +1

Query: 1   TNLSISLSDASSRKQGYVVVETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIV 162
           TNLS+SL+D+SSRKQG+VVVETNFR+YAYSTSKLHCEILRLF+RVEYQLPNLIV
Sbjct: 282 TNLSMSLADSSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIV 335


Top