BLASTX nr result

ID: Atractylodes22_contig00037826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037826
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-...   179   2e-43
emb|CBI41056.3| unnamed protein product [Vitis vinifera]              179   2e-43
gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]              177   6e-43
ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis t...   177   6e-43
gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa ...   177   6e-43

>ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 687

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/90 (93%), Positives = 89/90 (98%)
 Frame = +3

Query: 3   SADHHIHYYDLRNISQPLHIFSGHRKAVSYVKFLSNHELASASTDSTLRLWDVKQNIPLR 182
           SADHHIHYYDLRNISQPLH+FSGHRKAVSYVKFLSN+ELASASTDSTLRLWDVK+N+P+R
Sbjct: 537 SADHHIHYYDLRNISQPLHVFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENMPVR 596

Query: 183 TFRGHVNEKNFVGLTVNSEYIACGSETNEV 272
           TFRGH NEKNFVGLTVNSEYIACGSETNEV
Sbjct: 597 TFRGHSNEKNFVGLTVNSEYIACGSETNEV 626


>emb|CBI41056.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/90 (93%), Positives = 89/90 (98%)
 Frame = +3

Query: 3   SADHHIHYYDLRNISQPLHIFSGHRKAVSYVKFLSNHELASASTDSTLRLWDVKQNIPLR 182
           SADHHIHYYDLRNISQPLH+FSGHRKAVSYVKFLSN+ELASASTDSTLRLWDVK+N+P+R
Sbjct: 452 SADHHIHYYDLRNISQPLHVFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENMPVR 511

Query: 183 TFRGHVNEKNFVGLTVNSEYIACGSETNEV 272
           TFRGH NEKNFVGLTVNSEYIACGSETNEV
Sbjct: 512 TFRGHSNEKNFVGLTVNSEYIACGSETNEV 541


>gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
          Length = 675

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/90 (91%), Positives = 88/90 (97%)
 Frame = +3

Query: 3   SADHHIHYYDLRNISQPLHIFSGHRKAVSYVKFLSNHELASASTDSTLRLWDVKQNIPLR 182
           SADHHIHYYDLRNISQPLH+FSGH+KAVSYVKFLSN+ELASASTDSTLRLWDVK N+P+R
Sbjct: 525 SADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVR 584

Query: 183 TFRGHVNEKNFVGLTVNSEYIACGSETNEV 272
           TFRGH NEKNFVGLTVNSEY+ACGSETNEV
Sbjct: 585 TFRGHTNEKNFVGLTVNSEYLACGSETNEV 614


>ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
           gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3
           ubiquitin-protein ligase COP1; AltName:
           Full=Constitutive photomorphogenesis protein 1
           gi|2702280|gb|AAB91983.1| COP1 regulatory protein
           [Arabidopsis thaliana] gi|95147316|gb|ABF57293.1|
           At2g32950 [Arabidopsis thaliana]
           gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase
           COP1 [Arabidopsis thaliana]
          Length = 675

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/90 (91%), Positives = 88/90 (97%)
 Frame = +3

Query: 3   SADHHIHYYDLRNISQPLHIFSGHRKAVSYVKFLSNHELASASTDSTLRLWDVKQNIPLR 182
           SADHHIHYYDLRNISQPLH+FSGH+KAVSYVKFLSN+ELASASTDSTLRLWDVK N+P+R
Sbjct: 525 SADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVR 584

Query: 183 TFRGHVNEKNFVGLTVNSEYIACGSETNEV 272
           TFRGH NEKNFVGLTVNSEY+ACGSETNEV
Sbjct: 585 TFRGHTNEKNFVGLTVNSEYLACGSETNEV 614


>gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa subsp. rapa]
          Length = 677

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/90 (91%), Positives = 88/90 (97%)
 Frame = +3

Query: 3   SADHHIHYYDLRNISQPLHIFSGHRKAVSYVKFLSNHELASASTDSTLRLWDVKQNIPLR 182
           SADHHIHYYDLRNISQPLH+FSGH+KAVSYVKFLSN+ELASASTDSTLRLWDVK N+P+R
Sbjct: 527 SADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVR 586

Query: 183 TFRGHVNEKNFVGLTVNSEYIACGSETNEV 272
           TFRGH NEKNFVGLTVNSEY+ACGSETNEV
Sbjct: 587 TFRGHTNEKNFVGLTVNSEYLACGSETNEV 616


Top