BLASTX nr result

ID: Atractylodes22_contig00037822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037822
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...    90   2e-16
ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
emb|CBI26347.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    82   4e-14
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14

>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/67 (65%), Positives = 50/67 (74%)
 Frame = +2

Query: 8   INSTYGTLIDVYSKGGIREKAIYWLDVMNMKEMEPDEVTMGIVVQMYKTARXXXXXXXXX 187
           INSTYGTLIDVYSKGG+REKA+ WL+ MN + MEPDEVTMGIVVQMYK A          
Sbjct: 238 INSTYGTLIDVYSKGGLREKALDWLEKMNKQGMEPDEVTMGIVVQMYKKAGEFQKAEEFF 297

Query: 188 XXWSVRK 208
             WS+R+
Sbjct: 298 KKWSLRE 304


>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
           [Vitis vinifera]
          Length = 881

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/93 (49%), Positives = 56/93 (60%)
 Frame = +2

Query: 8   INSTYGTLIDVYSKGGIREKAIYWLDVMNMKEMEPDEVTMGIVVQMYKTARXXXXXXXXX 187
           +NSTYGTLIDVYSKGG+ E+A++WLD MN + MEPDEVTMG+VVQ YK A          
Sbjct: 230 VNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFF 289

Query: 188 XXWSVRKGXXXXXXXXXSNSTPTKVAALSGDSQ 286
             WS+ K            S PT  +A+   SQ
Sbjct: 290 KNWSLGK----TLKDEGKTSEPTATSAVESASQ 318


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = +2

Query: 8   INSTYGTLIDVYSKGGIREKAIYWLDVMNMKEMEPDEVTMGIVVQMYKTARXXXXXXXXX 187
           +NSTYGTLIDVYSKGG+ E+A++WLD MN + MEPDEVTMG+VVQ YK A          
Sbjct: 230 VNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFF 289

Query: 188 XXWSV 202
             WS+
Sbjct: 290 KNWSL 294


>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g23020-like [Cucumis sativus]
          Length = 859

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/64 (62%), Positives = 46/64 (71%)
 Frame = +2

Query: 8   INSTYGTLIDVYSKGGIREKAIYWLDVMNMKEMEPDEVTMGIVVQMYKTARXXXXXXXXX 187
           INSTYGTLIDVYSKGG +E+A+ WL+ MN + MEPDEVTMGIVVQ+YK A          
Sbjct: 221 INSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFF 280

Query: 188 XXWS 199
             WS
Sbjct: 281 KKWS 284


>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Cucumis sativus]
          Length = 858

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/64 (62%), Positives = 46/64 (71%)
 Frame = +2

Query: 8   INSTYGTLIDVYSKGGIREKAIYWLDVMNMKEMEPDEVTMGIVVQMYKTARXXXXXXXXX 187
           INSTYGTLIDVYSKGG +E+A+ WL+ MN + MEPDEVTMGIVVQ+YK A          
Sbjct: 220 INSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFF 279

Query: 188 XXWS 199
             WS
Sbjct: 280 KKWS 283


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