BLASTX nr result

ID: Atractylodes22_contig00037813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037813
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   102   4e-20
ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus c...   100   1e-19
emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera]   100   2e-19
ref|NP_001042518.1| Os01g0234900 [Oryza sativa Japonica Group] g...    98   8e-19
ref|XP_002876454.1| seven in absentia family protein [Arabidopsi...    97   1e-18

>ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Vitis vinifera]
           gi|297746416|emb|CBI16472.3| unnamed protein product
           [Vitis vinifera]
          Length = 308

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = +3

Query: 3   SSNVEGRSC--LRLCGSAGGRQGMASNSAVHELLECPVCLSIMHPPIHQCPNGHTICVVC 176
           ++N+E RS    +     GG+ GM S S VHELLECPVC+ +MHPPIHQCPNGHT+C  C
Sbjct: 25  TANLELRSSPFRKATTGVGGKHGMPSTSGVHELLECPVCMDLMHPPIHQCPNGHTLCSNC 84

Query: 177 KSKVKNSCPICRQELG 224
           K++V N CP CR ELG
Sbjct: 85  KARVHNCCPTCRFELG 100


>ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus communis]
           gi|223525415|gb|EEF28013.1| Ubiquitin ligase SINAT2,
           putative [Ricinus communis]
          Length = 304

 Score =  100 bits (250), Expect = 1e-19
 Identities = 40/58 (68%), Positives = 49/58 (84%)
 Frame = +3

Query: 51  GGRQGMASNSAVHELLECPVCLSIMHPPIHQCPNGHTICVVCKSKVKNSCPICRQELG 224
           GG+QG+ SN+ VHELLECPVC ++M+PPIHQCPNGHT+C  CKS+V N CP CR +LG
Sbjct: 39  GGKQGLYSNNGVHELLECPVCTNLMYPPIHQCPNGHTLCSNCKSRVHNCCPTCRYDLG 96


>emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera]
          Length = 308

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
 Frame = +3

Query: 3   SSNVEGRSC--LRLCGSAGGRQGMASNSAVHELLECPVCLSIMHPPIHQCPNGHTICVVC 176
           ++N+E RS    +     GG+ G  S S VHELLECPVC+ +MHPPIHQCPNGHT+C  C
Sbjct: 25  TANLELRSSPFRKATTGVGGKHGXPSTSGVHELLECPVCMDLMHPPIHQCPNGHTLCSNC 84

Query: 177 KSKVKNSCPICRQELG 224
           K++V N CP CR ELG
Sbjct: 85  KARVHNCCPTCRFELG 100


>ref|NP_001042518.1| Os01g0234900 [Oryza sativa Japonica Group]
           gi|56783949|dbj|BAD81386.1| putative ubiquitin ligase
           SINAT5 [Oryza sativa Japonica Group]
           gi|113532049|dbj|BAF04432.1| Os01g0234900 [Oryza sativa
           Japonica Group] gi|215767958|dbj|BAH00187.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 347

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 40/62 (64%), Positives = 46/62 (74%)
 Frame = +3

Query: 39  CGSAGGRQGMASNSAVHELLECPVCLSIMHPPIHQCPNGHTICVVCKSKVKNSCPICRQE 218
           C   GG  G A+ S VHELLECPVC + M+PPIHQC NGHT+C  CK++V N CP CRQE
Sbjct: 65  CSKGGGGGGAAAGSGVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQE 124

Query: 219 LG 224
           LG
Sbjct: 125 LG 126


>ref|XP_002876454.1| seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322292|gb|EFH52713.1| seven in absentia family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/62 (66%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
 Frame = +3

Query: 42  GSAG-GRQGMASNSAVHELLECPVCLSIMHPPIHQCPNGHTICVVCKSKVKNSCPICRQE 218
           GSAG G+ G+ SN+ V+ELLECPVC ++M+PPIHQCPNGHT+C  CK +V+N+CP CR E
Sbjct: 40  GSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKVRVQNTCPTCRYE 99

Query: 219 LG 224
           LG
Sbjct: 100 LG 101


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