BLASTX nr result

ID: Atractylodes22_contig00037703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037703
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27295.3| unnamed protein product [Vitis vinifera]              209   2e-51
ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis ...   209   2e-51
ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu...   207   7e-51
ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2...   134   4e-29
ref|XP_003520115.1| PREDICTED: ninja-family protein AFP2-like [G...   134   5e-29

>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  209 bits (531), Expect = 2e-51
 Identities = 143/356 (40%), Positives = 169/356 (47%), Gaps = 29/356 (8%)
 Frame = +2

Query: 293  RDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFGVDKSNTKLVRSSSIAAI 472
            RDLL+R M +S           GED  EE+ELNLGLSLGGRFGVDKS  KL+RSSSIA  
Sbjct: 6    RDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEKKLMRSSSIAGS 65

Query: 473  LPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWRKRKELQXXXXXXXXXXX 652
            + + +                  SYSSL+RTSSLP ET+EEWRKRKELQ           
Sbjct: 66   IGITR--------DEDALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRR 117

Query: 653  XXXQRNLTRVEREEYVAAMXXXXXXXXXXXXXXNWDIGGGVEXXXXXXXXXXXXXXXXXX 832
               QRN      +E                   ++                         
Sbjct: 118  SEKQRNKEGCVEDEKRDLDSPIVGFRSNIEKAHHYVAANRSAAAFGFPTWAAAAAAAKGK 177

Query: 833  XXXXXXEFTPPSLPGSVESQ---TSSMSEFESRHLQXXXXXXXXXXXXV-QSSQEXXXXX 1000
                   F   +  GS ESQ   +SSMSE ES+ LQ              QS QE     
Sbjct: 178  GSGSLQNFVQQTSQGSGESQGGSSSSMSELESKPLQGYSSCGEARSLACNQSLQEQSIQE 237

Query: 1001 XXXXXXXXHKGKEIRCNTVDM-------------------------PCVFTQGDSPSGRR 1105
                          R +  +M                         PCVFT+GD P+GRR
Sbjct: 238  ASGSSRTKPNEGTGRTSGAEMENPSKNPGLSENRGRGSGMNFMGDMPCVFTRGDGPNGRR 297

Query: 1106 IEGILYKYGKGEEVKIMCVCHGSFLSPAEFVKHAGGTDVLHPLKHILVNPNSSSYL 1273
            IEGILYKYGKGEEV+IMCVCHGSFLSPAEFVKHAGG DV HPL+HI+VNP+S+S++
Sbjct: 298  IEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGGDVAHPLRHIVVNPSSASFV 353


>ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis vinifera]
          Length = 360

 Score =  209 bits (531), Expect = 2e-51
 Identities = 143/356 (40%), Positives = 169/356 (47%), Gaps = 29/356 (8%)
 Frame = +2

Query: 293  RDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFGVDKSNTKLVRSSSIAAI 472
            RDLL+R M +S           GED  EE+ELNLGLSLGGRFGVDKS  KL+RSSSIA  
Sbjct: 13   RDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEKKLMRSSSIAGS 72

Query: 473  LPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWRKRKELQXXXXXXXXXXX 652
            + + +                  SYSSL+RTSSLP ET+EEWRKRKELQ           
Sbjct: 73   IGITR--------DEDALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRR 124

Query: 653  XXXQRNLTRVEREEYVAAMXXXXXXXXXXXXXXNWDIGGGVEXXXXXXXXXXXXXXXXXX 832
               QRN      +E                   ++                         
Sbjct: 125  SEKQRNKEGCVEDEKRDLDSPIVGFRSNIEKAHHYVAANRSAAAFGFPTWAAAAAAAKGK 184

Query: 833  XXXXXXEFTPPSLPGSVESQ---TSSMSEFESRHLQXXXXXXXXXXXXV-QSSQEXXXXX 1000
                   F   +  GS ESQ   +SSMSE ES+ LQ              QS QE     
Sbjct: 185  GSGSLQNFVQQTSQGSGESQGGSSSSMSELESKPLQGYSSCGEARSLACNQSLQEQSIQE 244

Query: 1001 XXXXXXXXHKGKEIRCNTVDM-------------------------PCVFTQGDSPSGRR 1105
                          R +  +M                         PCVFT+GD P+GRR
Sbjct: 245  ASGSSRTKPNEGTGRTSGAEMENPSKNPGLSENRGRGSGMNFMGDMPCVFTRGDGPNGRR 304

Query: 1106 IEGILYKYGKGEEVKIMCVCHGSFLSPAEFVKHAGGTDVLHPLKHILVNPNSSSYL 1273
            IEGILYKYGKGEEV+IMCVCHGSFLSPAEFVKHAGG DV HPL+HI+VNP+S+S++
Sbjct: 305  IEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGGDVAHPLRHIVVNPSSASFV 360


>ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis]
            gi|223549250|gb|EEF50739.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 355

 Score =  207 bits (526), Expect = 7e-51
 Identities = 137/351 (39%), Positives = 178/351 (50%), Gaps = 10/351 (2%)
 Frame = +2

Query: 242  ASNEMGNLSLQTKNRFSRDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFG 421
            +S  M +LSL+  N++ RDLL+RFM + S     + S+  ED  EE+ELNLGLSLGGRFG
Sbjct: 14   SSRTMESLSLEI-NKYPRDLLQRFMSNDSQ--QLKTSEGEEDNTEEIELNLGLSLGGRFG 70

Query: 422  VDKSNTKLVRSSSIAAILPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWR 601
            VDK++ KL RSSSIA  +P+V+                  SY  LIRTSSLP ETEEEWR
Sbjct: 71   VDKTSKKLTRSSSIAGSIPLVR-------DHDAFNTQPAVSYPLLIRTSSLPTETEEEWR 123

Query: 602  KRKELQXXXXXXXXXXXXXXQRNLT----RVEREEYVAAMXXXXXXXXXXXXXXNWDIGG 769
            KRKE+Q              Q+NL      +  E+    +              N + G 
Sbjct: 124  KRKEMQTLRRMEAKRRRSEKQKNLNLNRGELSLEDERKGLNANRGNWVAPTWSRNVNRGN 183

Query: 770  GVEXXXXXXXXXXXXXXXXXXXXXXXXEFTPPSLPGSVESQTSSMSEFESRHLQXXXXXX 949
             ++                        E     + G+  S   + S   ++ LQ      
Sbjct: 184  TLQGLIGQQQGSQGSVESQGGSSSGISEMESKPVQGT-SSGGEARSPASNQSLQDRINQE 242

Query: 950  XXXXXXVQSSQEXXXXXXXXXXXXXHKGKEIRCNTVDM------PCVFTQGDSPSGRRIE 1111
                   ++++               +  EIR   + M      PCVFT GD P+GR++E
Sbjct: 243  AVGSSRSKTNENINRTSSMENPSRKLESAEIRGREIGMNPMEDMPCVFTIGDGPNGRKVE 302

Query: 1112 GILYKYGKGEEVKIMCVCHGSFLSPAEFVKHAGGTDVLHPLKHILVNPNSS 1264
            GILYKYGKGEEV+IMCVCHGSFLSPAEFVKHAGG DV HPL+HI+VN + S
Sbjct: 303  GILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGRDVDHPLRHIVVNTSGS 353


>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  134 bits (338), Expect = 4e-29
 Identities = 60/83 (72%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
 Frame = +2

Query: 1025 HKGKEIRCNTV-DMPCVFTQGDSPSGRRIEGILYKYGKGEEVKIMCVCHGSFLSPAEFVK 1201
            ++G+EI  N + DMPCVFT+GD P+GRR++GILYKYGKGEEV+IMCVCHGSF SPAEFVK
Sbjct: 252  NRGREIGTNAMEDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCVCHGSFHSPAEFVK 311

Query: 1202 HAGGTDVLHPLKHILVNPNSSSY 1270
            HAGG+DV HPL+HI+VNP+  S+
Sbjct: 312  HAGGSDVDHPLRHIVVNPSGPSF 334



 Score =  104 bits (259), Expect = 6e-20
 Identities = 67/140 (47%), Positives = 84/140 (60%)
 Frame = +2

Query: 254 MGNLSLQTKNRFSRDLLRRFMVSSSAAGDPRRSDPGEDPGEEVELNLGLSLGGRFGVDKS 433
           M +LSL+  NR+ RDL++R ++SS A      +  GE+  EE+ELNLGLSLGGRFGVDK+
Sbjct: 1   MESLSLEI-NRYPRDLVQR-LISSDAQQYKTATSEGEE-AEEIELNLGLSLGGRFGVDKT 57

Query: 434 NTKLVRSSSIAAILPVVKXXXXXXXXXXXXXXXXXXSYSSLIRTSSLPVETEEEWRKRKE 613
           + KL RSSSIA  +P+++                  SY  LIRTSSLP ETEEEWRKRKE
Sbjct: 58  SEKLTRSSSIAGSIPLLR--------DHDALSTPPVSYPFLIRTSSLPTETEEEWRKRKE 109

Query: 614 LQXXXXXXXXXXXXXXQRNL 673
            Q              Q+NL
Sbjct: 110 NQSLRRMEAKRRRSEKQKNL 129


>ref|XP_003520115.1| PREDICTED: ninja-family protein AFP2-like [Glycine max]
          Length = 411

 Score =  134 bits (337), Expect = 5e-29
 Identities = 60/81 (74%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
 Frame = +2

Query: 1031 GKEIRCNTV-DMPCVFTQGDSPSGRRIEGILYKYGKGEEVKIMCVCHGSFLSPAEFVKHA 1207
            G+ I  N++ DMPCVFT+GD P+GRRIEGILYKYGKGEEV+IMCVCHG+FLSPAEFVKHA
Sbjct: 331  GRHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHA 390

Query: 1208 GGTDVLHPLKHILVNPNSSSY 1270
            GG DV HPL+HI+VNP+++ +
Sbjct: 391  GGGDVAHPLRHIVVNPSAAPF 411



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
 Frame = +2

Query: 374 EEVELNLGLSLGGRFGVDKS--NTKLVRSSSIAAILPVVKXXXXXXXXXXXXXXXXXXSY 547
           EEVELNLGLSLGGRFGVDK+    KL+RSSS+   +P+ +                  ++
Sbjct: 90  EEVELNLGLSLGGRFGVDKNAKKKKLLRSSSVVGTMPLFREDDAVAPSAA--------AF 141

Query: 548 SSLIRTSSLPVETEEEWRKRKELQ 619
            +L+RTSSLP ETEEEWR+RKE+Q
Sbjct: 142 PALMRTSSLPTETEEEWRRRKEMQ 165


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