BLASTX nr result

ID: Atractylodes22_contig00037678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037678
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   206   1e-51
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
emb|CBI20738.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ...   198   3e-49

>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  206 bits (525), Expect = 1e-51
 Identities = 97/143 (67%), Positives = 119/143 (83%)
 Frame = -3

Query: 443  PEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQGDMKTGKRAATK 264
            PEIEHYSCLVDALGRAGR++EAE +IAS+P +A+ SMYR LLGACR +GD +T KR A K
Sbjct: 1335 PEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADK 1394

Query: 263  LLKLEPFESSTYVLVSNVYAASKQWSEVADARRSMKSKKVKKEAGFSWIDVKNKGHVFVV 84
            LL L+P +SS YVL+SN+YAAS+QW +V DAR  MK K VKK+ GFSWIDVKNK H+FVV
Sbjct: 1395 LLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVV 1454

Query: 83   DD*SHPEREIIYEKVKDLIKLIK 15
            DD SHP+  +IYEK++DL+K I+
Sbjct: 1455 DDRSHPQASLIYEKIEDLMKRIR 1477


>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  206 bits (525), Expect = 1e-51
 Identities = 97/143 (67%), Positives = 119/143 (83%)
 Frame = -3

Query: 443  PEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQGDMKTGKRAATK 264
            PEIEHYSCLVDALGRAGR++EAE +IAS+P +A+ SMYR LLGACR +GD +T KR A K
Sbjct: 1335 PEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADK 1394

Query: 263  LLKLEPFESSTYVLVSNVYAASKQWSEVADARRSMKSKKVKKEAGFSWIDVKNKGHVFVV 84
            LL L+P +SS YVL+SN+YAAS+QW +V DAR  MK K VKK+ GFSWIDVKNK H+FVV
Sbjct: 1395 LLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVV 1454

Query: 83   DD*SHPEREIIYEKVKDLIKLIK 15
            DD SHP+  +IYEK++DL+K I+
Sbjct: 1455 DDRSHPQASLIYEKIEDLMKRIR 1477


>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  199 bits (505), Expect = 3e-49
 Identities = 91/145 (62%), Positives = 121/145 (83%)
 Frame = -3

Query: 443  PEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQGDMKTGKRAATK 264
            PEIEHYSCLVDALGRAG V+EA+K+I ++P +A+ S+ R LLGACR+QGD++TGKR A +
Sbjct: 1343 PEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAAR 1402

Query: 263  LLKLEPFESSTYVLVSNVYAASKQWSEVADARRSMKSKKVKKEAGFSWIDVKNKGHVFVV 84
            L  LEPF+S+ YVL+SN+YAA+ +W +V DAR+ MK K VKK+ GFSWIDVKN  H+FVV
Sbjct: 1403 LFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVV 1462

Query: 83   DD*SHPEREIIYEKVKDLIKLIKGD 9
            DD SHP+ +IIY+KV++++K I+ D
Sbjct: 1463 DDRSHPQADIIYDKVEEMMKTIRED 1487


>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  199 bits (505), Expect = 3e-49
 Identities = 91/145 (62%), Positives = 121/145 (83%)
 Frame = -3

Query: 443  PEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQGDMKTGKRAATK 264
            PEIEHYSCLVDALGRAG V+EA+K+I ++P +A+ S+ R LLGACR+QGD++TGKR A +
Sbjct: 628  PEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAAR 687

Query: 263  LLKLEPFESSTYVLVSNVYAASKQWSEVADARRSMKSKKVKKEAGFSWIDVKNKGHVFVV 84
            L  LEPF+S+ YVL+SN+YAA+ +W +V DAR+ MK K VKK+ GFSWIDVKN  H+FVV
Sbjct: 688  LFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVV 747

Query: 83   DD*SHPEREIIYEKVKDLIKLIKGD 9
            DD SHP+ +IIY+KV++++K I+ D
Sbjct: 748  DDRSHPQADIIYDKVEEMMKTIRED 772


>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313032|gb|EFH43455.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 997

 Score =  198 bits (504), Expect = 3e-49
 Identities = 97/143 (67%), Positives = 119/143 (83%)
 Frame = -3

Query: 443  PEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQGDMKTGKRAATK 264
            PEIEHYSCL DALGRAG V+EAE LI S+ +EA+ SMYRTLL ACR+QGD +TGKR ATK
Sbjct: 760  PEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATK 819

Query: 263  LLKLEPFESSTYVLVSNVYAASKQWSEVADARRSMKSKKVKKEAGFSWIDVKNKGHVFVV 84
            LL+LEP +SS YVL+SN+YAA+ +W E+  AR  MK  KVKK+ GFSWI+VKNK H+FVV
Sbjct: 820  LLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVV 879

Query: 83   DD*SHPEREIIYEKVKDLIKLIK 15
            DD S+P+ E+IY+KVKD+I+ IK
Sbjct: 880  DDRSNPQTELIYKKVKDMIRDIK 902


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