BLASTX nr result

ID: Atractylodes22_contig00037661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037661
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    58   3e-14
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-13
gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indi...    51   3e-13
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        62   5e-13
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    49   1e-12

>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 57.8 bits (138), Expect(2) = 3e-14
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = +2

Query: 290 GSDGFSCKFFKAAWGTVGEDILDAVHEFFQNGWIICQWNHTLISLIPKFVS 442
           G DGFS +FF A W  +G ++ +A+HEFF +G ++ QWN T + LIPK  +
Sbjct: 363 GPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITN 413



 Score = 45.1 bits (105), Expect(2) = 3e-14
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
 Frame = +1

Query: 7   FFHKAVKERNNMNRIEALCDKERHFFVGNE-VPAAIVKHFEKFLGSNGGGSIIEQR--LH 177
           +FHK    R ++N I  L D       G + +    V++F+  LGS  G  + EQ    +
Sbjct: 267 YFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENHCVEYFQSNLGSEQGLPLFEQADISN 326

Query: 178 LIDCKLSREEAMDMVRPFSSEKIRVALFSIGDDKA 282
           L+  + S  + + +  PFSSE+I+ A FS+  +KA
Sbjct: 327 LLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNKA 361


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 56.6 bits (135), Expect(2) = 1e-13
 Identities = 26/53 (49%), Positives = 34/53 (64%)
 Frame = +2

Query: 287 PGSDGFSCKFFKAAWGTVGEDILDAVHEFFQNGWIICQWNHTLISLIPKFVSP 445
           PG DGF+  FFK  W  VGED+++AV   FQ   ++ + N T ISLIPK  +P
Sbjct: 432 PGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTRRMLKEMNATSISLIPKVANP 484



 Score = 44.3 bits (103), Expect(2) = 1e-13
 Identities = 25/96 (26%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
 Frame = +1

Query: 7   FFHKAVKERNNMNRIEALCDKERHFFVGNE-VPAAIVKHFEKFLGSNGGGSIIEQRL--H 177
           +FHK+V  R+N N++ +L  ++     G+E V + ++ +F + LG +    ++ + +   
Sbjct: 337 YFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVKSEVIAYFHRVLGVDQMPRVLNEEVMES 396

Query: 178 LIDCKLSREEAMDMVRPFSSEKIRVALFSIGDDKAP 285
            I+ KLS  +   + +  + ++I+ A+FS+ ++KAP
Sbjct: 397 AINLKLSSTQQHVLAQVVTRKEIKHAMFSLKNNKAP 432


>gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indica Group]
          Length = 320

 Score = 50.8 bits (120), Expect(2) = 3e-13
 Identities = 25/53 (47%), Positives = 28/53 (52%)
 Frame = +2

Query: 287 PGSDGFSCKFFKAAWGTVGEDILDAVHEFFQNGWIICQWNHTLISLIPKFVSP 445
           PG DG    F+KA W  VGE + D V E  + G I   WN T I LIPK   P
Sbjct: 248 PGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDTTIVLIPKVKKP 300



 Score = 48.9 bits (115), Expect(2) = 3e-13
 Identities = 30/93 (32%), Positives = 49/93 (52%)
 Frame = +1

Query: 7   FFHKAVKERNNMNRIEALCDKERHFFVGNEVPAAIVKHFEKFLGSNGGGSIIEQRLHLID 186
           FFH +  ER   NRI  L  ++  +    E   A++  F K L ++ GG   ++ L ++D
Sbjct: 156 FFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVD 215

Query: 187 CKLSREEAMDMVRPFSSEKIRVALFSIGDDKAP 285
            K+S      +   F+ E+++ AL +IGD KAP
Sbjct: 216 RKVSGAMNESLRAEFTREEVKEALDAIGDLKAP 248


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 62.0 bits (149), Expect(2) = 5e-13
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +2

Query: 290 GSDGFSCKFFKAAWGTVGEDILDAVHEFFQNGWIICQWNHTLISLIPKFVSP 445
           G DGF+ +FF  +W  VG ++ DA+ EFF +G ++ QWN T I LIPK V+P
Sbjct: 466 GPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNP 517



 Score = 37.0 bits (84), Expect(2) = 5e-13
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
 Frame = +1

Query: 7   FFHKAVKERNNMNRIEALCDKERHFFVGNE-VPAAIVKHFEKFLGSNGGGSIIEQR--LH 177
           +FH+    RN+ N I AL D         E +      +F   LG      ++EQ     
Sbjct: 370 YFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGDEVDPYLMEQNDMNL 429

Query: 178 LIDCKLSREEAMDMVRPFSSEKIRVALFSIGDDKA 282
           L+  + S  +  ++   FS+E IR ALFS+  +K+
Sbjct: 430 LLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKS 464


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 48.9 bits (115), Expect(2) = 1e-12
 Identities = 30/93 (32%), Positives = 49/93 (52%)
 Frame = +1

Query: 7   FFHKAVKERNNMNRIEALCDKERHFFVGNEVPAAIVKHFEKFLGSNGGGSIIEQRLHLID 186
           FFH +  ER   NRI  L  ++  +    E   A++  F K L ++ GG   ++ L ++D
Sbjct: 610 FFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVD 669

Query: 187 CKLSREEAMDMVRPFSSEKIRVALFSIGDDKAP 285
            K+S      +   F+ E+++ AL +IGD KAP
Sbjct: 670 RKVSGAMNESLRAEFTREEVKEALDAIGDLKAP 702



 Score = 48.5 bits (114), Expect(2) = 1e-12
 Identities = 24/53 (45%), Positives = 27/53 (50%)
 Frame = +2

Query: 287 PGSDGFSCKFFKAAWGTVGEDILDAVHEFFQNGWIICQWNHTLISLIPKFVSP 445
           PG DG    F+KA W  VGE + D V E  + G I   WN   I LIPK   P
Sbjct: 702 PGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKP 754


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