BLASTX nr result

ID: Atractylodes22_contig00037614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037614
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   114   1e-23
ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   113   2e-23
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   111   5e-23
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18

>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/110 (54%), Positives = 78/110 (70%)
 Frame = -3

Query: 332 LVCERMLSEEKIPETGKVGNIICYLCKAGMVKEAHSVYLLAKEKQRYPAWSSVNFLISSL 153
           +VCE+ML +  +P++ K+G IIC+ CK    K+AH VYLLAKEK + P   ++ FLI SL
Sbjct: 190 IVCEKMLDQGPLPDSEKIGKIICWFCKGSKAKDAHKVYLLAKEKSKCPPKPALYFLIGSL 249

Query: 152 CDRKKNDPDSVHLALKMLEDFSGGEKQKYAIKQFSSVIQGLCRINDFEGA 3
           C     D  +V+LAL+ML DF  GE +KYAIK FSSVI+GLCRI D +GA
Sbjct: 250 C----RDDGTVNLALEMLNDFE-GEAKKYAIKPFSSVIRGLCRIKDLDGA 294


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/109 (55%), Positives = 76/109 (69%)
 Frame = -3

Query: 329 VCERMLSEEKIPETGKVGNIICYLCKAGMVKEAHSVYLLAKEKQRYPAWSSVNFLISSLC 150
           V E+ML  E +P+T K+G IIC+ CK     +A+ VYLLAKEK +YP   SVNFLI  LC
Sbjct: 299 VREKMLRAEALPDTEKIGKIICWFCKGDKANDAYLVYLLAKEKNKYPPQPSVNFLIGLLC 358

Query: 149 DRKKNDPDSVHLALKMLEDFSGGEKQKYAIKQFSSVIQGLCRINDFEGA 3
            +     ++V LAL+ML+ FS G K+KYAIK FSSVI+ LCRI D +GA
Sbjct: 359 QKN----ETVKLALEMLDAFS-GPKRKYAIKPFSSVIRALCRIKDLDGA 402


>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/109 (51%), Positives = 82/109 (75%)
 Frame = -3

Query: 329 VCERMLSEEKIPETGKVGNIICYLCKAGMVKEAHSVYLLAKEKQRYPAWSSVNFLISSLC 150
           VCE+ML+   +P++ KV NII + CK   VK+A+ VYLLAKEK +YP  ++VNFLI+SLC
Sbjct: 280 VCEKMLNASSLPDSEKVWNIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLC 339

Query: 149 DRKKNDPDSVHLALKMLEDFSGGEKQKYAIKQFSSVIQGLCRINDFEGA 3
                +  ++ +A++ML+DFS GE++KYAIK +++VI+GLCR  D +GA
Sbjct: 340 ----REDGTISMAVEMLDDFS-GEERKYAIKPYTAVIRGLCRSKDVDGA 383


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/109 (51%), Positives = 81/109 (74%)
 Frame = -3

Query: 329 VCERMLSEEKIPETGKVGNIICYLCKAGMVKEAHSVYLLAKEKQRYPAWSSVNFLISSLC 150
           VCE+ML+   +P++ KV NII + CK   VK+A+ VYLLAKEK +YP  ++VNFLI+SLC
Sbjct: 263 VCEKMLNASSLPDSEKVWNIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLC 322

Query: 149 DRKKNDPDSVHLALKMLEDFSGGEKQKYAIKQFSSVIQGLCRINDFEGA 3
                +  ++ +A++ML+DFS GE+ KYAIK +++VI+GLCR  D +GA
Sbjct: 323 ----REDGTISMAVEMLDDFS-GEECKYAIKPYTAVIRGLCRSKDVDGA 366


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/105 (50%), Positives = 66/105 (62%)
 Frame = -3

Query: 329 VCERMLSEEKIPETGKVGNIICYLCKAGMVKEAHSVYLLAKEKQRYPAWSSVNFLISSLC 150
           VCE+ML    +PE+ +VG II   CK    K AHSVYLLAKEK        +N LI SLC
Sbjct: 193 VCEKMLDSGSMPESNRVGKIISLFCKGNKAKNAHSVYLLAKEKHVNLPQCYMNILIHSLC 252

Query: 149 DRKKNDPDSVHLALKMLEDFSGGEKQKYAIKQFSSVIQGLCRIND 15
                D ++V LAL+ML DFS GE+++ AIK +  VI+ LCRI D
Sbjct: 253 ----RDDETVKLALEMLNDFSTGERRR-AIKPYMEVIRSLCRIKD 292


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