BLASTX nr result
ID: Atractylodes22_contig00037608
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00037608 (209 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata] 106 2e-21 ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|... 99 5e-19 ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|... 98 8e-19 ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-... 96 4e-18 emb|CBI17597.3| unnamed protein product [Vitis vinifera] 96 4e-18 >gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata] Length = 1403 Score = 106 bits (265), Expect = 2e-21 Identities = 54/69 (78%), Positives = 61/69 (88%) Frame = -1 Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30 +SL +EL P L GWKTEYTAG+ S +QSQSR VQNKIV++F KG+VNIIVATSILEEGLD Sbjct: 403 RSLXNELLPDLSGWKTEYTAGHSSLLQSQSRNVQNKIVEEFRKGVVNIIVATSILEEGLD 462 Query: 29 VQSCNLVIR 3 VQSCNLVIR Sbjct: 463 VQSCNLVIR 471 >ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1| dicer-like protein [Populus trichocarpa] Length = 1468 Score = 98.6 bits (244), Expect = 5e-19 Identities = 50/69 (72%), Positives = 60/69 (86%) Frame = -1 Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30 +SLLS+L P WKT+Y AGN+S +QSQ+R +QN+IV++F KGMVNIIVATSILEEGLD Sbjct: 455 ESLLSKLLPKHGSWKTKYIAGNNSGLQSQTRKIQNEIVEEFRKGMVNIIVATSILEEGLD 514 Query: 29 VQSCNLVIR 3 VQSCNLVIR Sbjct: 515 VQSCNLVIR 523 >ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1| dicer-like protein [Populus trichocarpa] Length = 1408 Score = 97.8 bits (242), Expect = 8e-19 Identities = 50/69 (72%), Positives = 59/69 (85%) Frame = -1 Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30 +SLL EL P WKT+Y AGN+S +QSQ+R +QN+IV++F KGMVNIIVATSILEEGLD Sbjct: 404 ESLLRELLPKHSSWKTKYIAGNNSGLQSQTRQMQNEIVEEFRKGMVNIIVATSILEEGLD 463 Query: 29 VQSCNLVIR 3 VQSCNLVIR Sbjct: 464 VQSCNLVIR 472 >ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera] Length = 1394 Score = 95.5 bits (236), Expect = 4e-18 Identities = 48/69 (69%), Positives = 57/69 (82%) Frame = -1 Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30 + LLS+L P L GW+ Y AGN S +QSQSR VQN +V++F KGMVN+IV+TSILEEGLD Sbjct: 405 QKLLSKLLPKLSGWEAGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLD 464 Query: 29 VQSCNLVIR 3 VQSCNLVIR Sbjct: 465 VQSCNLVIR 473 >emb|CBI17597.3| unnamed protein product [Vitis vinifera] Length = 1340 Score = 95.5 bits (236), Expect = 4e-18 Identities = 48/69 (69%), Positives = 57/69 (82%) Frame = -1 Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30 + LLS+L P L GW+ Y AGN S +QSQSR VQN +V++F KGMVN+IV+TSILEEGLD Sbjct: 351 QKLLSKLLPKLSGWEAGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLD 410 Query: 29 VQSCNLVIR 3 VQSCNLVIR Sbjct: 411 VQSCNLVIR 419