BLASTX nr result

ID: Atractylodes22_contig00037608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037608
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]             106   2e-21
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|...    99   5e-19
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...    98   8e-19
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...    96   4e-18
emb|CBI17597.3| unnamed protein product [Vitis vinifera]               96   4e-18

>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/69 (78%), Positives = 61/69 (88%)
 Frame = -1

Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30
           +SL +EL P L GWKTEYTAG+ S +QSQSR VQNKIV++F KG+VNIIVATSILEEGLD
Sbjct: 403 RSLXNELLPDLSGWKTEYTAGHSSLLQSQSRNVQNKIVEEFRKGVVNIIVATSILEEGLD 462

Query: 29  VQSCNLVIR 3
           VQSCNLVIR
Sbjct: 463 VQSCNLVIR 471


>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa]
           gi|222852017|gb|EEE89564.1| dicer-like protein [Populus
           trichocarpa]
          Length = 1468

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = -1

Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30
           +SLLS+L P    WKT+Y AGN+S +QSQ+R +QN+IV++F KGMVNIIVATSILEEGLD
Sbjct: 455 ESLLSKLLPKHGSWKTKYIAGNNSGLQSQTRKIQNEIVEEFRKGMVNIIVATSILEEGLD 514

Query: 29  VQSCNLVIR 3
           VQSCNLVIR
Sbjct: 515 VQSCNLVIR 523


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa]
           gi|222864159|gb|EEF01290.1| dicer-like protein [Populus
           trichocarpa]
          Length = 1408

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/69 (72%), Positives = 59/69 (85%)
 Frame = -1

Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30
           +SLL EL P    WKT+Y AGN+S +QSQ+R +QN+IV++F KGMVNIIVATSILEEGLD
Sbjct: 404 ESLLRELLPKHSSWKTKYIAGNNSGLQSQTRQMQNEIVEEFRKGMVNIIVATSILEEGLD 463

Query: 29  VQSCNLVIR 3
           VQSCNLVIR
Sbjct: 464 VQSCNLVIR 472


>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = -1

Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30
           + LLS+L P L GW+  Y AGN S +QSQSR VQN +V++F KGMVN+IV+TSILEEGLD
Sbjct: 405 QKLLSKLLPKLSGWEAGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLD 464

Query: 29  VQSCNLVIR 3
           VQSCNLVIR
Sbjct: 465 VQSCNLVIR 473


>emb|CBI17597.3| unnamed protein product [Vitis vinifera]
          Length = 1340

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = -1

Query: 209 KSLLSELHPILFGWKTEYTAGNHSTMQSQSRGVQNKIVDQFCKGMVNIIVATSILEEGLD 30
           + LLS+L P L GW+  Y AGN S +QSQSR VQN +V++F KGMVN+IV+TSILEEGLD
Sbjct: 351 QKLLSKLLPKLSGWEAGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLD 410

Query: 29  VQSCNLVIR 3
           VQSCNLVIR
Sbjct: 411 VQSCNLVIR 419


Top