BLASTX nr result

ID: Atractylodes22_contig00037583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037583
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   192   3e-47
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   184   9e-45
ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  192 bits (487), Expect = 3e-47
 Identities = 84/141 (59%), Positives = 117/141 (82%), Gaps = 1/141 (0%)
 Frame = +3

Query: 6   KLTCANYMCMVLCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKAEE 185
           ++T  NYMC++LCLVKLGD+ EAE+IF EWES+C +YD+RVSN+LLGAY+R G M+KAE 
Sbjct: 285 RITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAES 344

Query: 186 LHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKESVK-VKSCDWRPSPTIVESIS 362
           LHLHTL++GGCPNYKTWEILMEG+++++NM+KAI AMK+    +K CDWRP+  +V +I+
Sbjct: 345 LHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAMKKGFSMLKHCDWRPNHGLVTAIA 404

Query: 363 EYFEESGNLEEAVRYLEVVRE 425
            Y EE GN+ +  +Y++V+ +
Sbjct: 405 RYLEEHGNVNDLNQYVKVIHQ 425


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  189 bits (480), Expect = 2e-46
 Identities = 83/141 (58%), Positives = 117/141 (82%), Gaps = 3/141 (2%)
 Frame = +3

Query: 6   KLTCANYMCMVLCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKAEE 185
           ++ CA+YMC++ CLVK+GD+  AE++F EWE+ C +YD+RVSN+LLGAYVR+GLM KAE 
Sbjct: 320 RIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAES 379

Query: 186 LHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKES---VKVKSCDWRPSPTIVES 356
            HLHT+++GGCPNYKTWEILMEG+V+++ M+KAI AMK+    +KV+ CDWRPS +I+ +
Sbjct: 380 FHLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMA 439

Query: 357 ISEYFEESGNLEEAVRYLEVV 419
           I+E+FE+ GN E+A  Y++ V
Sbjct: 440 IAEHFEKHGNFEDANHYIKAV 460


>ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 496

 Score =  187 bits (476), Expect = 6e-46
 Identities = 84/136 (61%), Positives = 114/136 (83%), Gaps = 1/136 (0%)
 Frame = +3

Query: 6   KLTCANYMCMVLCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKAEE 185
           +++CANY+C++ CLVKLGD+ +A++IF+EWES C++YD+RVSN+LLGAYVR+GLME+AE 
Sbjct: 306 RISCANYICILTCLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYVRNGLMEEAES 365

Query: 186 LHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKESV-KVKSCDWRPSPTIVESIS 362
           LHLHTL+KGGCPNYKT EILMEGYV  + M++AI+ MK ++  +K C WRP   IV +I+
Sbjct: 366 LHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCHWRPPHGIVLAIA 425

Query: 363 EYFEESGNLEEAVRYL 410
           EY E+ GNLE A +Y+
Sbjct: 426 EYLEKDGNLEYADKYI 441


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  184 bits (466), Expect = 9e-45
 Identities = 82/139 (58%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
 Frame = +3

Query: 6   KLTCANYMCMVLCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKAEE 185
           ++TCANYMC++ CLVK+GD+ EAEK+F +WE  CR+YD+RVSN+LLGAYVR GLM KAE 
Sbjct: 304 RITCANYMCVLSCLVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAES 363

Query: 186 LHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKESVK-VKSCDWRPSPTIVESIS 362
           LHLHTL +GGCPNYKT EILMEG+V+++ M+KAI AM +++  ++ C WRPS  I+ SI+
Sbjct: 364 LHLHTLDRGGCPNYKTLEILMEGWVKSQKMDKAIDAMTQAISMLEHCHWRPSHGIIMSIA 423

Query: 363 EYFEESGNLEEAVRYLEVV 419
           E+ E + N E+A  +++V+
Sbjct: 424 EHLERNRNFEDANHFIQVI 442


>ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 530

 Score =  183 bits (465), Expect = 1e-44
 Identities = 81/140 (57%), Positives = 115/140 (82%), Gaps = 1/140 (0%)
 Frame = +3

Query: 6   KLTCANYMCMVLCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKAEE 185
           +++CANY+C+++CLVKLGD+ +A++IF+EWES C++YD+RVSN+LLGAY R+G ME+AE 
Sbjct: 331 RISCANYICILICLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYARNGSMEEAES 390

Query: 186 LHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKESV-KVKSCDWRPSPTIVESIS 362
           LHLHTL+KGGCPNYKT EILMEGYV  + M++AI+ MK ++  +K C WRP   +V +I+
Sbjct: 391 LHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCHWRPPHGLVLAIA 450

Query: 363 EYFEESGNLEEAVRYLEVVR 422
           EY E+ GNL+ A +Y+  +R
Sbjct: 451 EYLEKDGNLKYANKYITDLR 470


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