BLASTX nr result

ID: Atractylodes22_contig00037580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037580
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...   157   9e-37
ref|XP_002307852.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ...   152   4e-35
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...   149   3e-34
ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33

>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Vitis vinifera]
           gi|297745081|emb|CBI38673.3| unnamed protein product
           [Vitis vinifera]
          Length = 900

 Score =  157 bits (397), Expect = 9e-37
 Identities = 78/108 (72%), Positives = 92/108 (85%)
 Frame = +2

Query: 2   SLYQKGGVIDDAEFAFSQMRNLKIVCHSAYSAMITMYTRLGLHEKAEEVIGFLRKDGVIL 181
           SLYQKG  + D+E+AFSQMR+  I C SAYSAMIT+YTR+ L++KAEEVI F+++D VIL
Sbjct: 251 SLYQKGWNVADSEYAFSQMRSFGITCQSAYSAMITIYTRMSLYDKAEEVIDFIQEDKVIL 310

Query: 182 NLENWLVLLNAYSQQGKLDEAEKVLAAMHLAGFLPHIVAYNTLITGYG 325
           NLENWLVLLNAYSQQGKL EAE+VL +M  AGF P+IVAYN LITGYG
Sbjct: 311 NLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYG 358


>ref|XP_002307852.1| predicted protein [Populus trichocarpa] gi|222853828|gb|EEE91375.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/107 (70%), Positives = 91/107 (85%)
 Frame = +2

Query: 5   LYQKGGVIDDAEFAFSQMRNLKIVCHSAYSAMITMYTRLGLHEKAEEVIGFLRKDGVILN 184
           LYQKG  +++AEF+F+QMR+  I+C SAYSAMIT+YTRL L++KAEEVIG +R D V+LN
Sbjct: 20  LYQKGWNVEEAEFSFAQMRSFGIICQSAYSAMITIYTRLSLYDKAEEVIGLMRDDKVVLN 79

Query: 185 LENWLVLLNAYSQQGKLDEAEKVLAAMHLAGFLPHIVAYNTLITGYG 325
           LENWLVLLNAYSQQGKL++AE++L AM  A F P IVAYN LITGYG
Sbjct: 80  LENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNILITGYG 126


>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315195|gb|EFH45618.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 906

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/107 (68%), Positives = 89/107 (83%)
 Frame = +2

Query: 5   LYQKGGVIDDAEFAFSQMRNLKIVCHSAYSAMITMYTRLGLHEKAEEVIGFLRKDGVILN 184
           LYQK   +D+AEFAFS MR  +IVC SAYS+MIT+YTRL L+EKAEEVI  +++D V L 
Sbjct: 256 LYQKNWNVDEAEFAFSHMRKFEIVCESAYSSMITIYTRLRLYEKAEEVINLMKQDRVRLK 315

Query: 185 LENWLVLLNAYSQQGKLDEAEKVLAAMHLAGFLPHIVAYNTLITGYG 325
           LENWLV+LNAYSQQGK+++AE VL +M  AGF P+I+AYNTLITGYG
Sbjct: 316 LENWLVMLNAYSQQGKMEQAESVLISMEAAGFAPNIIAYNTLITGYG 362


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/107 (66%), Positives = 89/107 (83%)
 Frame = +2

Query: 5   LYQKGGVIDDAEFAFSQMRNLKIVCHSAYSAMITMYTRLGLHEKAEEVIGFLRKDGVILN 184
           LYQKG  +++AEF FS+MR+  I+C SAYSAMIT+YTRL L+ KAEE+IG + +D V +N
Sbjct: 305 LYQKGWNVEEAEFVFSKMRSFGIICQSAYSAMITIYTRLSLYNKAEEIIGLMGEDKVAMN 364

Query: 185 LENWLVLLNAYSQQGKLDEAEKVLAAMHLAGFLPHIVAYNTLITGYG 325
           +ENWLVLLNAYSQQG+L+EAE+VL  M  A F P+IVA+NTLITGYG
Sbjct: 365 VENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYG 411


>ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Glycine max]
          Length = 854

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/107 (67%), Positives = 90/107 (84%)
 Frame = +2

Query: 5   LYQKGGVIDDAEFAFSQMRNLKIVCHSAYSAMITMYTRLGLHEKAEEVIGFLRKDGVILN 184
           LY+KG  +++AEFAFS+MR  +IVC SAYS+MIT+YTRL L+EKAE VI  +RKD V+ N
Sbjct: 203 LYRKGWNLEEAEFAFSRMRGFRIVCESAYSSMITIYTRLRLYEKAEGVIELMRKDEVVPN 262

Query: 185 LENWLVLLNAYSQQGKLDEAEKVLAAMHLAGFLPHIVAYNTLITGYG 325
           LENWLV+LNAYSQQGKL +AE+VL AM  AGF  +IVA+NT+ITG+G
Sbjct: 263 LENWLVMLNAYSQQGKLGDAERVLEAMQEAGFSDNIVAFNTMITGFG 309


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