BLASTX nr result

ID: Atractylodes22_contig00037547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037547
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522482.1| PREDICTED: uncharacterized protein LOC100817...   102   3e-30
gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptas...    94   2e-28
emb|CAN81299.1| hypothetical protein VITISV_006980 [Vitis vinifera]    82   7e-27
emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]    81   1e-26
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    81   1e-26

>ref|XP_003522482.1| PREDICTED: uncharacterized protein LOC100817327 [Glycine max]
          Length = 498

 Score =  102 bits (253), Expect(2) = 3e-30
 Identities = 47/84 (55%), Positives = 65/84 (77%)
 Frame = -1

Query: 258 KGCYKLATVLVLINGSPTLEFGLQRGVRQGDPRSPFLFLIAAEALNVVMEEAMEKGVF*G 79
           KGC K A++ VL+NGSPT EF  QRG+RQGDP +PFL+ + AEALN +M +AME+ ++ G
Sbjct: 92  KGCLKFASISVLVNGSPTAEFLPQRGLRQGDPLAPFLYNVIAEALNGLMRKAMEENLYKG 151

Query: 78  IKIGRDKVGVSHLQFADDLIFFGR 7
             +G ++V +S LQ+ADD IFFG+
Sbjct: 152 FSVGSNQVNISILQYADDTIFFGK 175



 Score = 55.1 bits (131), Expect(2) = 3e-30
 Identities = 24/57 (42%), Positives = 34/57 (59%)
 Frame = -3

Query: 418 LIADSVIASIKKSKEQAFIFKADLEKAFDCINWTFLDNTTDQMGFGNRWRKWLKRVL 248
           LIA+ VI   K+S +   +FK D EKA+D ++W FL     + GF  +W KW+K  L
Sbjct: 39  LIANEVIEEAKRSNKTCLVFKVDYEKAYDSVSWEFLLYMLRRTGFSPKWSKWIKGCL 95


>gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 320

 Score = 94.0 bits (232), Expect(2) = 2e-28
 Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
 Frame = -1

Query: 258 KGCYKLATVLVLINGSPTLEFGLQRGVRQGDPRSPFLFLIAAEALNVVMEEAMEKGVF*G 79
           K C    T  +L+NG+PTLEF L+RG+RQGDP SPFLFL+AAE LN++M+  +E  +F G
Sbjct: 137 KECVCTTTTSMLVNGNPTLEFPLERGLRQGDPLSPFLFLLAAEGLNIMMQSMVENNIFTG 196

Query: 78  IKIG-RDKVGVSHLQFADDLIFFG 10
             +G  D   VSHLQFADD +  G
Sbjct: 197 YFVGAHDTTVVSHLQFADDTLLVG 220



 Score = 56.6 bits (135), Expect(2) = 2e-28
 Identities = 21/54 (38%), Positives = 35/54 (64%)
 Frame = -3

Query: 418 LIADSVIASIKKSKEQAFIFKADLEKAFDCINWTFLDNTTDQMGFGNRWRKWLK 257
           L+A+ ++    K ++   +FK D EKA++ ++W +LD  T +MGF   WRKW+K
Sbjct: 84  LVANGIVDEACKCRKDLMLFKVDFEKAYESVDWGYLDAITGRMGFPTLWRKWIK 137


>emb|CAN81299.1| hypothetical protein VITISV_006980 [Vitis vinifera]
          Length = 580

 Score = 82.4 bits (202), Expect(2) = 7e-27
 Identities = 39/82 (47%), Positives = 54/82 (65%)
 Frame = -1

Query: 258 KGCYKLATVLVLINGSPTLEFGLQRGVRQGDPRSPFLFLIAAEALNVVMEEAMEKGVF*G 79
           +GC    +  +L+NG+        RG+RQGDP SPFLF I A+ L+ ++  A E+ VF G
Sbjct: 362 RGCLSSVSFAILVNGNAKGXVKASRGLRQGDPLSPFLFTIVADVLSRMLLRAEERNVFEG 421

Query: 78  IKIGRDKVGVSHLQFADDLIFF 13
            ++GR++  VSHLQFADD IFF
Sbjct: 422 FRVGRNRTRVSHLQFADDTIFF 443



 Score = 63.2 bits (152), Expect(2) = 7e-27
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = -3

Query: 418 LIADSVIASIKKSKEQAFIFKADLEKAFDCINWTFLDNTTDQMGFGNRWRKWLKRVL 248
           LIA+ ++   K+S E+  +FK D EKA+D ++W FLD+  ++ GF  RWRKW++  L
Sbjct: 309 LIANEIVDEKKRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEKKGFNPRWRKWIRGCL 365


>emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]
          Length = 1882

 Score = 81.3 bits (199), Expect(2) = 1e-26
 Identities = 40/82 (48%), Positives = 54/82 (65%)
 Frame = -1

Query: 258  KGCYKLATVLVLINGSPTLEFGLQRGVRQGDPRSPFLFLIAAEALNVVMEEAMEKGVF*G 79
            +GC    +  VL+NG+        RG+RQGDP SPFLF I A+ L+ ++ +A E+ V  G
Sbjct: 1275 RGCLSSVSFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEG 1334

Query: 78   IKIGRDKVGVSHLQFADDLIFF 13
             K+GR++  VSHLQFADD IFF
Sbjct: 1335 FKVGRNRTRVSHLQFADDTIFF 1356



 Score = 63.5 bits (153), Expect(2) = 1e-26
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = -3

Query: 418  LIADSVIASIKKSKEQAFIFKADLEKAFDCINWTFLDNTTDQMGFGNRWRKWLKRVL 248
            LIA+ ++   ++S E+  +FK D EKA+D ++W FLD+  +  GFG RWRKW++  L
Sbjct: 1222 LIANEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWRKWMRGCL 1278


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 81.3 bits (199), Expect(2) = 1e-26
 Identities = 40/82 (48%), Positives = 54/82 (65%)
 Frame = -1

Query: 258  KGCYKLATVLVLINGSPTLEFGLQRGVRQGDPRSPFLFLIAAEALNVVMEEAMEKGVF*G 79
            +GC    +  VL+NG+        RG+RQGDP SPFLF I A+ L+ ++ +A E+ V  G
Sbjct: 1441 RGCLSSVSFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEG 1500

Query: 78   IKIGRDKVGVSHLQFADDLIFF 13
             K+GR++  VSHLQFADD IFF
Sbjct: 1501 FKVGRNRTRVSHLQFADDTIFF 1522



 Score = 63.5 bits (153), Expect(2) = 1e-26
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = -3

Query: 418  LIADSVIASIKKSKEQAFIFKADLEKAFDCINWTFLDNTTDQMGFGNRWRKWLKRVL 248
            LIA+ ++   ++S E+  +FK D EKA+D ++W FLD+  +  GFG RWRKW++  L
Sbjct: 1388 LIANEIVDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEMKGFGIRWRKWMRGCL 1444


Top