BLASTX nr result

ID: Atractylodes22_contig00037540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037540
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]        186   2e-45
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   185   4e-45
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   184   9e-45
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   183   1e-44
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   181   4e-44

>dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]
          Length = 904

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/115 (74%), Positives = 101/115 (87%)
 Frame = -1

Query: 345 LNKMTIPDRFPIPLIEELMDELYGAQYFSKIDLRAGYHQIRVASQDVHKTAFKTHCGHFE 166
           LN MT+ DRFPIPLIE+LMDEL GA  FSKIDLRAGYHQ+R+A++D+HK  FKTH GH+E
Sbjct: 504 LNGMTMKDRFPIPLIEDLMDELGGAVVFSKIDLRAGYHQVRMATEDIHKPTFKTHSGHYE 563

Query: 165 FLVMPFGLTNAPSTFQGLMNQLFKPYLRKFVLVFFDDILIYSSDWDTHLQHLKSV 1
           +LVMPFGLTNAP+TFQGLMN +FKP+LRKFVL FFDDILIYSS  + H+QHL+ V
Sbjct: 564 YLVMPFGLTNAPATFQGLMNAIFKPFLRKFVLFFFDDILIYSSSMEEHVQHLQQV 618


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  185 bits (469), Expect = 4e-45
 Identities = 86/112 (76%), Positives = 100/112 (89%)
 Frame = -1

Query: 345  LNKMTIPDRFPIPLIEELMDELYGAQYFSKIDLRAGYHQIRVASQDVHKTAFKTHCGHFE 166
            LN +TIPD+FPIP+IEEL DEL GA++FSKIDL+AGYHQIR+AS D+ KTAF+TH GH+E
Sbjct: 1597 LNSVTIPDKFPIPVIEELFDELNGARWFSKIDLKAGYHQIRMASGDIEKTAFRTHEGHYE 1656

Query: 165  FLVMPFGLTNAPSTFQGLMNQLFKPYLRKFVLVFFDDILIYSSDWDTHLQHL 10
            FLVMPFGLTNAPSTFQ LMN +FKPYLRKF+LVFFDDILIYS + + HL HL
Sbjct: 1657 FLVMPFGLTNAPSTFQSLMNTVFKPYLRKFILVFFDDILIYSKNLEVHLTHL 1708


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  184 bits (466), Expect = 9e-45
 Identities = 79/116 (68%), Positives = 103/116 (88%)
 Frame = -1

Query: 348 ALNKMTIPDRFPIPLIEELMDELYGAQYFSKIDLRAGYHQIRVASQDVHKTAFKTHCGHF 169
           ALNK T+PD+FPIP+IEEL+DEL+GA+++SK+DL++GYHQ+RV  +D+HKTAF+TH  H+
Sbjct: 440 ALNKATVPDKFPIPVIEELLDELHGARFYSKLDLKSGYHQVRVKEEDIHKTAFRTHEDHY 499

Query: 168 EFLVMPFGLTNAPSTFQGLMNQLFKPYLRKFVLVFFDDILIYSSDWDTHLQHLKSV 1
           E+LVMPFGL NAPSTFQ LMN +F+  LRKFVLVFFDDIL+YS DW TH++H++ V
Sbjct: 500 EYLVMPFGLMNAPSTFQSLMNDVFRLLLRKFVLVFFDDILVYSQDWKTHMEHVEEV 555


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/115 (75%), Positives = 98/115 (85%)
 Frame = -1

Query: 345  LNKMTIPDRFPIPLIEELMDELYGAQYFSKIDLRAGYHQIRVASQDVHKTAFKTHCGHFE 166
            LN MT+ D FPIPLIE+LMDEL GA  FSKIDLRAGYHQ+R+   D+ KTAFKTH GHFE
Sbjct: 660  LNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHFE 719

Query: 165  FLVMPFGLTNAPSTFQGLMNQLFKPYLRKFVLVFFDDILIYSSDWDTHLQHLKSV 1
            +LVMPFGLTNAP+TFQGLMN +FKP+LRKFVLVFFDDIL+YSS  + H QHLK V
Sbjct: 720  YLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQV 774


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  181 bits (460), Expect = 4e-44
 Identities = 85/116 (73%), Positives = 101/116 (87%)
 Frame = -1

Query: 348  ALNKMTIPDRFPIPLIEELMDELYGAQYFSKIDLRAGYHQIRVASQDVHKTAFKTHCGHF 169
            ALN+ TIPD++PIP+IEEL+DEL GA  FSK+DL++GY QIR+   DV KTAFKTH GH+
Sbjct: 773  ALNEATIPDKYPIPVIEELLDELKGATVFSKLDLKSGYFQIRMKLSDVEKTAFKTHEGHY 832

Query: 168  EFLVMPFGLTNAPSTFQGLMNQLFKPYLRKFVLVFFDDILIYSSDWDTHLQHLKSV 1
            EFLVMPFGLTNAPSTFQ +MN LF+PYLRKFVLVFFDDIL+YS D  THL+HL++V
Sbjct: 833  EFLVMPFGLTNAPSTFQSVMNDLFRPYLRKFVLVFFDDILVYSPDMKTHLKHLETV 888


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