BLASTX nr result

ID: Atractylodes22_contig00037506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037506
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39176.3| unnamed protein product [Vitis vinifera]              206   4e-51
ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containi...   206   4e-51
emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]   206   4e-51
ref|XP_002540235.1| pentatricopeptide repeat-containing protein,...   162   3e-38
ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37

>emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  206 bits (523), Expect = 4e-51
 Identities = 122/220 (55%), Positives = 147/220 (66%), Gaps = 18/220 (8%)
 Frame = +3

Query: 18  ISSKIPRQTSVY--DPFK-----KFITTSSS-DNLEGLIDPHFNSPESNSDFQRDSGVAG 173
           +S+ +P  T  +   PFK     +FI TSSS DNL GL+D  F+ PES       S V  
Sbjct: 10  LSNSLPMTTHFFASKPFKISTISRFICTSSSEDNLHGLVDSDFSVPES-------SRVES 62

Query: 174 NLAEEFAILQGSL---------SVEKSESRKCS-DAYVICNAIRDNGADFGDKTQKILRN 323
            LAEEFA L+ SL         SV KS S +CS DA +I + IR+ G  FG KTQK LR 
Sbjct: 63  FLAEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQ 122

Query: 324 FREKLSESLVVDVLRLLQNAELAVKFFIWVGRQIGYNHTLAVYDTLLDIMGCNNADRISD 503
           FREKL+E+LVVDVL L++N EL VKFFIW GRQIGY HT  VY  LL+++GC   DR+ +
Sbjct: 123 FREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPE 182

Query: 504 NFLREIKDDDDKEVLGKLLNV*IRKYCQNGSWNAALEELG 623
            FLREI+ D+DKE+LGKLLNV IRK C+NG WN ALEELG
Sbjct: 183 QFLREIR-DEDKEILGKLLNVLIRKCCRNGLWNVALEELG 221


>ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  206 bits (523), Expect = 4e-51
 Identities = 122/220 (55%), Positives = 147/220 (66%), Gaps = 18/220 (8%)
 Frame = +3

Query: 18  ISSKIPRQTSVY--DPFK-----KFITTSSS-DNLEGLIDPHFNSPESNSDFQRDSGVAG 173
           +S+ +P  T  +   PFK     +FI TSSS DNL GL+D  F+ PES       S V  
Sbjct: 10  LSNSLPMTTHFFASKPFKISTISRFICTSSSEDNLHGLVDSDFSVPES-------SRVES 62

Query: 174 NLAEEFAILQGSL---------SVEKSESRKCS-DAYVICNAIRDNGADFGDKTQKILRN 323
            LAEEFA L+ SL         SV KS S +CS DA +I + IR+ G  FG KTQK LR 
Sbjct: 63  FLAEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQ 122

Query: 324 FREKLSESLVVDVLRLLQNAELAVKFFIWVGRQIGYNHTLAVYDTLLDIMGCNNADRISD 503
           FREKL+E+LVVDVL L++N EL VKFFIW GRQIGY HT  VY  LL+++GC   DR+ +
Sbjct: 123 FREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPE 182

Query: 504 NFLREIKDDDDKEVLGKLLNV*IRKYCQNGSWNAALEELG 623
            FLREI+ D+DKE+LGKLLNV IRK C+NG WN ALEELG
Sbjct: 183 QFLREIR-DEDKEILGKLLNVLIRKCCRNGLWNVALEELG 221


>emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  206 bits (523), Expect = 4e-51
 Identities = 122/220 (55%), Positives = 147/220 (66%), Gaps = 18/220 (8%)
 Frame = +3

Query: 18  ISSKIPRQTSVY--DPFK-----KFITTSSS-DNLEGLIDPHFNSPESNSDFQRDSGVAG 173
           +S+ +P  T  +   PFK     +FI TSSS DNL GL+D  F+ PES       S V  
Sbjct: 10  LSNSLPMTTHFFASKPFKISTISRFICTSSSEDNLHGLVDSDFSVPES-------SRVES 62

Query: 174 NLAEEFAILQGSL---------SVEKSESRKCS-DAYVICNAIRDNGADFGDKTQKILRN 323
            LAEEFA L+ SL         SV KS S +CS DA +I + IR+ G  FG KTQK LR 
Sbjct: 63  FLAEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQ 122

Query: 324 FREKLSESLVVDVLRLLQNAELAVKFFIWVGRQIGYNHTLAVYDTLLDIMGCNNADRISD 503
           FREKL+E+LVVDVL L++N EL VKFFIW GRQIGY HT  VY  LL+++GC   DR+ +
Sbjct: 123 FREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPE 182

Query: 504 NFLREIKDDDDKEVLGKLLNV*IRKYCQNGSWNAALEELG 623
            FLREI+ D+DKE+LGKLLNV IRK C+NG WN ALEELG
Sbjct: 183 QFLREIR-DEDKEILGKLLNVLIRKCCRNGLWNVALEELG 221


>ref|XP_002540235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223497791|gb|EEF22148.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 264

 Score =  162 bits (411), Expect = 3e-38
 Identities = 96/194 (49%), Positives = 120/194 (61%), Gaps = 8/194 (4%)
 Frame = +3

Query: 66  KFITTSSSDNLEGLIDPHFNSPESNSDFQRDSGVAGNLAEEFAILQGSLSVEKSESRKC- 242
           +FI+TSSSDNL GL+DP   S   NS     +       EEF+ L+ SL       +K  
Sbjct: 22  RFISTSSSDNLHGLVDPEDPSTSDNSRVDYFTN------EEFSFLRDSLLAPNDARQKLH 75

Query: 243 -----SDAYVICNAIRDNGADFGDKTQKILRNFREKLSESLVVDVLRLLQNAELAVKFFI 407
                +DA  I  AI +N   FG   QK LR +R KL++SLVV+VL  ++N EL + FF+
Sbjct: 76  AGKFSNDAVSIAQAILNNHDGFGINAQKFLRQYRPKLTQSLVVEVLNQIKNPELGIHFFL 135

Query: 408 WVGRQIGYNHTLAVYDTLLDIM--GCNNADRISDNFLREIKDDDDKEVLGKLLNV*IRKY 581
           W GRQIGY HTL VY+ LL+I+       D +  + L +IK DD+KEVLGKLLNV IRK 
Sbjct: 136 WAGRQIGYCHTLPVYNALLEIIETSTETNDGVPQHLLLQIK-DDEKEVLGKLLNVLIRKL 194

Query: 582 CQNGSWNAALEELG 623
           CQNG WNAALEELG
Sbjct: 195 CQNGLWNAALEELG 208


>ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  160 bits (405), Expect = 2e-37
 Identities = 94/199 (47%), Positives = 127/199 (63%), Gaps = 10/199 (5%)
 Frame = +3

Query: 57  PFKKFITTSSSDNLEGLIDPHFNSPESNSDFQRDSGVAGNLAEEFAILQGSLSVEKSES- 233
           PF  F +TSS D+L GL+DP  +     S  Q  S       +E ++L+ SL    ++S 
Sbjct: 40  PFAHF-STSSPDDLPGLVDPDQSLSSDTSRVQCFS------PQEVSLLRDSLLDSHADSC 92

Query: 234 ---------RKCSDAYVICNAIRDNGADFGDKTQKILRNFREKLSESLVVDVLRLLQNAE 386
                    +  ++A++I +AIR+    FG+KT  +LR FR+KL+  LVV++L  L++ E
Sbjct: 93  SSHRTLQTVKISNEAFLILDAIRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLKSPE 152

Query: 387 LAVKFFIWVGRQIGYNHTLAVYDTLLDIMGCNNADRISDNFLREIKDDDDKEVLGKLLNV 566
           L VKFF+W GRQIGY+HT AVY  LLD+    + DR+ + FLREI+  DDKEVLGKLLNV
Sbjct: 153 LCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIR-GDDKEVLGKLLNV 211

Query: 567 *IRKYCQNGSWNAALEELG 623
            IRK C+NG WN ALEELG
Sbjct: 212 LIRKCCRNGLWNVALEELG 230


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