BLASTX nr result

ID: Atractylodes22_contig00037494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037494
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago ...   111   7e-23
ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252...   110   9e-23
emb|CBI23013.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002318430.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Ar...   100   9e-20

>ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago truncatula]
           gi|355477563|gb|AES58766.1| hypothetical protein
           MTR_1g008050 [Medicago truncatula]
          Length = 1675

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/98 (55%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = -2

Query: 290 KKRVNWGAELCFLDD-SDHAFRNSLKLTKFELNRVHNLRLNDGSPP-AKIYENMWDLTPD 117
           K+ +NW +   FL+D SD+  +N +    F  N+ H LRLNDG    A  +ENMWDLTPD
Sbjct: 79  KREINWNSGGLFLEDVSDNKIKNVVDFKNFIPNKCHILRLNDGKGDVADTFENMWDLTPD 138

Query: 116 TELLMELPEEYTFETALADLIDNSLQAVWSNDEKERRL 3
           T+LL+ELPE+Y FE A+ADLIDN+LQAVWSN++  R+L
Sbjct: 139 TDLLLELPEDYNFEAAIADLIDNALQAVWSNEKNSRKL 176


>ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]
          Length = 1887

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/98 (57%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
 Frame = -2

Query: 290 KKRVNWGAELCFL-DDSDHAFRNSLKLTKFELNRVHNLRLNDGS-PPAKIYENMWDLTPD 117
           ++++ W ++  FL D S++  ++++   KFE ++ H L+LNDGS   A  ++NMWDLTPD
Sbjct: 111 RQKIMWKSKDIFLVDASENRMKHTVNFRKFEPHKCHILQLNDGSGQSADTFKNMWDLTPD 170

Query: 116 TELLMELPEEYTFETALADLIDNSLQAVWSNDEKERRL 3
           T+LL ELPEEY FETALADLIDNSLQAVWSN   ERRL
Sbjct: 171 TDLLAELPEEYAFETALADLIDNSLQAVWSNGMSERRL 208


>emb|CBI23013.3| unnamed protein product [Vitis vinifera]
          Length = 1718

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/98 (57%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
 Frame = -2

Query: 290 KKRVNWGAELCFL-DDSDHAFRNSLKLTKFELNRVHNLRLNDGS-PPAKIYENMWDLTPD 117
           ++++ W ++  FL D S++  ++++   KFE ++ H L+LNDGS   A  ++NMWDLTPD
Sbjct: 80  RQKIMWKSKDIFLVDASENRMKHTVNFRKFEPHKCHILQLNDGSGQSADTFKNMWDLTPD 139

Query: 116 TELLMELPEEYTFETALADLIDNSLQAVWSNDEKERRL 3
           T+LL ELPEEY FETALADLIDNSLQAVWSN   ERRL
Sbjct: 140 TDLLAELPEEYAFETALADLIDNSLQAVWSNGMSERRL 177


>ref|XP_002318430.1| predicted protein [Populus trichocarpa] gi|222859103|gb|EEE96650.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
 Frame = -2

Query: 290 KKRVNWGAELCFLDDSD-HAFRNSLKLTKFELNRVHNLRLNDGSPPAK-IYENMWDLTPD 117
           K+ +NW +E  F++D + +  +  LK   F  ++ H LRL+DGS      +ENMWDLTPD
Sbjct: 93  KRTLNWESESWFVEDGNGNLMKQRLKFKSFMPHKCHILRLHDGSAEVTDTFENMWDLTPD 152

Query: 116 TELLMELPEEYTFETALADLIDNSLQAVWSNDEKERR 6
           TELL E PEEYTFETALADLIDNSLQAVWS  E  R+
Sbjct: 153 TELLREFPEEYTFETALADLIDNSLQAVWSVGENGRK 189


>ref|NP_197816.3| gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana]
           gi|332005896|gb|AED93279.1| gamma-irradiation and
           mitomycin c induced 1 [Arabidopsis thaliana]
          Length = 1598

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/124 (45%), Positives = 81/124 (65%), Gaps = 7/124 (5%)
 Frame = -2

Query: 353 ISVKELADRVRKEHDGA-----VSNPKKRVNWGAELCF-LDDSDHAFRNSLKLTKFELNR 192
           IS++   + V+KE+D A     + + + +V+W +   F L+ +    +  ++   F+ + 
Sbjct: 46  ISMQSFVNLVKKEYDNARKDCLLMSKRMKVDWNSGGKFHLESNGGKMKGIVRFAAFKPDL 105

Query: 191 VHNLRLNDGSPPAK-IYENMWDLTPDTELLMELPEEYTFETALADLIDNSLQAVWSNDEK 15
            H +RL+DGS  A  +YEN+WDLTPDT+LL ELPE Y+FETALADLIDNSLQAVW   E 
Sbjct: 106 CHIIRLDDGSGIASTMYENLWDLTPDTDLLKELPENYSFETALADLIDNSLQAVWPYREG 165

Query: 14  ERRL 3
            R+L
Sbjct: 166 ARKL 169


Top