BLASTX nr result

ID: Atractylodes22_contig00037489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037489
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36896.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...    67   1e-09
ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helica...    56   3e-06
ref|XP_003609690.1| Pre-mRNA-splicing factor ATP-dependent RNA h...    56   3e-06
ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helica...    55   6e-06

>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/49 (63%), Positives = 34/49 (69%)
 Frame = +3

Query: 3    IQSCGMLRKAWDENRRTLYSEFLDWFQEGFQKDFDYLWENMQREVHLDP 149
            I SC MLR+AW EN R L+SE LDWFQE F K F+ LW  M  EV LDP
Sbjct: 1036 IDSCLMLREAWRENPRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDP 1084


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/49 (63%), Positives = 34/49 (69%)
 Frame = +3

Query: 3    IQSCGMLRKAWDENRRTLYSEFLDWFQEGFQKDFDYLWENMQREVHLDP 149
            I SC MLR+AW EN R L+SE LDWFQE F K F+ LW  M  EV LDP
Sbjct: 1352 IDSCLMLREAWRENPRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDP 1400


>ref|XP_003516464.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Glycine
            max]
          Length = 1403

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/48 (52%), Positives = 30/48 (62%)
 Frame = +3

Query: 3    IQSCGMLRKAWDENRRTLYSEFLDWFQEGFQKDFDYLWENMQREVHLD 146
            I S  MLR  W EN R L+SE LDWFQ+ F K F+ LW  M  EV ++
Sbjct: 1336 IDSSAMLRMVWKENPRELFSEILDWFQQSFHKHFEELWLQMLNEVLME 1383


>ref|XP_003609690.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 [Medicago
            truncatula] gi|355510745|gb|AES91887.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase prp16 [Medicago
            truncatula]
          Length = 1256

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = +3

Query: 3    IQSCGMLRKAWDENRRTLYSEFLDWFQEGFQKDFDYLWENMQREV 137
            I S  MLR  W +N R L+SE LDWFQ+GF+K F+ LW  M  EV
Sbjct: 1187 IDSSAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELWLQMLGEV 1231


>ref|XP_003521949.1| PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine
            max]
          Length = 1380

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/48 (50%), Positives = 30/48 (62%)
 Frame = +3

Query: 3    IQSCGMLRKAWDENRRTLYSEFLDWFQEGFQKDFDYLWENMQREVHLD 146
            I S  MLR  W EN R L+SE LDWFQ+ F K F+ LW  M  E+ ++
Sbjct: 1312 IDSSAMLRMVWKENPRELFSEILDWFQQSFHKHFEELWLQMVNELLME 1359


Top