BLASTX nr result
ID: Atractylodes22_contig00037483
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00037483 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp... 61 1e-07 ref|XP_002337334.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Vitis vinifera] Length = 1184 Score = 60.8 bits (146), Expect = 1e-07 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 19/117 (16%) Frame = +1 Query: 52 MSTAMFLSPTMLSNALNFPKKIHSS--------NPQIPHNSFSVP------APETHEKNH 189 MS A+FLS + + N FP +S NPQ H SF P T+ +H Sbjct: 1 MSPALFLSLSPIPNHSQFPSNSNSLSNSSIRILNPQRIH-SFKPPPISATTTATTNHPDH 59 Query: 190 EFKPNP---SNSATK--TAPWMKGPLVLEPNQVVDFSKPKNRKKASDDKDEKAGKSL 345 P +++A K TAPWMKGPL+L+PN+V+D SK + +K A EK +SL Sbjct: 60 SISSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSL 116 >ref|XP_002337334.1| predicted protein [Populus trichocarpa] gi|222838796|gb|EEE77147.1| predicted protein [Populus trichocarpa] Length = 234 Score = 57.0 bits (136), Expect = 2e-06 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 9/111 (8%) Frame = +1 Query: 40 ATITMSTAMFLSPTMLSNALNFPKKIHSS----NPQIPHNSFSVPAPETHEKNHEFKPNP 207 A+ + F S T +++ALN K H + N QI SF E P Sbjct: 2 ASSALCLKFFSSYTPITSALNPTTKKHGNTTLNNAQITTPSFMFANNNNKELAVLTNPIS 61 Query: 208 SNSATK-----TAPWMKGPLVLEPNQVVDFSKPKNRKKASDDKDEKAGKSL 345 ++AT T PW+KGPL+L+P+++++ + PKN+K +DK EK K+L Sbjct: 62 QSNATTNVKVPTPPWIKGPLILQPHELLNLTNPKNKKPIKNDKIEKDDKAL 112