BLASTX nr result

ID: Atractylodes22_contig00037478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037478
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517366.1| ring finger protein, putative [Ricinus commu...   182   5e-44
ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...   181   8e-44
ref|XP_002870718.1| zinc finger family protein [Arabidopsis lyra...   175   6e-42
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...   174   8e-42
ref|XP_004142353.1| PREDICTED: RING-H2 finger protein ATL46-like...   174   1e-41

>ref|XP_002517366.1| ring finger protein, putative [Ricinus communis]
           gi|223543377|gb|EEF44908.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score =  182 bits (461), Expect = 5e-44
 Identities = 108/203 (53%), Positives = 131/203 (64%), Gaps = 13/203 (6%)
 Frame = +1

Query: 1   IHCIDTWLLSNSSCPLCRGTLFTPEFSVENPVFDFHFDDSREEDDHVIGVSGNFKQS--- 171
           I+CIDTWLLSNS+CPLCRGTLFTP FS+ENP+FD  FDD RE D +       F  S   
Sbjct: 173 INCIDTWLLSNSTCPLCRGTLFTPGFSIENPMFD--FDDLRENDGYPGSGENGFPASQKI 230

Query: 172 -----GGGIEKRVYPVRLGKF-RATDGXXXXXXXXXXTSNSNLDARRCYSMGSYEYVVGN 333
                   IEK V PVRLGKF R TDG          TS+SNLDARRC+SMGSY+YV+G+
Sbjct: 231 MEIEEPAVIEKGVLPVRLGKFRRLTDG---TGEAGGETSSSNLDARRCFSMGSYQYVLGD 287

Query: 334 SELQVKFCPSRGNIGTKDDK---DKGNSSVDGGIDGKKISSRSKGESFSVSKIWLWSKRD 504
           S+L+V  C  R     K +K     G+  VDG ++GKKIS  +K ESFSVSKIWLWSK+ 
Sbjct: 288 SDLRVALCTDRHARSVKPEKGNDQNGSVLVDGDLEGKKISRVTKRESFSVSKIWLWSKKG 347

Query: 505 HHKFQDSSGTHM-INSSVNVSLP 570
             KF  S+   M + SS+++ LP
Sbjct: 348 --KFSSSTDAQMGMPSSLSLDLP 368


>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score =  181 bits (459), Expect = 8e-44
 Identities = 115/222 (51%), Positives = 133/222 (59%), Gaps = 30/222 (13%)
 Frame = +1

Query: 1   IHCIDTWLLSNSSCPLCRGTLFTPEFSVENPVFDFHFDDSREE---DDHVIGVSGNFKQS 171
           I CIDTWLLSNS+CPLCRGTLF P  ++EN VFD  F+DSREE     +  GVS   K  
Sbjct: 171 IECIDTWLLSNSTCPLCRGTLFNPGLAMENSVFD--FEDSREEGGLSSNGDGVSSAQKPP 228

Query: 172 GGGI--EKRVYPVRLGKFRAT-----------------DGXXXXXXXXXXTSNSNLDARR 294
              I  EKRV+ VRLGKFR                   +G          TS SNLDARR
Sbjct: 229 EDDIASEKRVFSVRLGKFRGLNGGGGGGGGGGGGGGGGEGEGEGERGGGETSCSNLDARR 288

Query: 295 CYSMGSYEYVVGNSELQVKFCPSRGNIGT----KDDKDK----GNSSVDGGIDGKKISSR 450
           C+SMGS++YVV NS+LQV  CP+R + G+    K  K +    GNSS DG ++GKKIS  
Sbjct: 289 CFSMGSFQYVVANSDLQVALCPNRADAGSDAVVKLMKGRGGHTGNSSTDGDVEGKKISIG 348

Query: 451 SKGESFSVSKIWLWSKRDHHKFQDSSGTHMINSSVNVSLPST 576
           SK ESFSVSKIWLW K+   KF  SS TH I  SVNV  P T
Sbjct: 349 SKDESFSVSKIWLWPKKG--KFPSSSDTH-IGPSVNVGFPWT 387


>ref|XP_002870718.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316554|gb|EFH46977.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score =  175 bits (443), Expect = 6e-42
 Identities = 100/196 (51%), Positives = 126/196 (64%), Gaps = 9/196 (4%)
 Frame = +1

Query: 1   IHCIDTWLLSNSSCPLCRGTLFTPEFSVENPVFDFHFDDSREEDDHVIGVSGNFKQSGGG 180
           ++CIDTWL SNS+CPLCRGTLF+P FS+ENP+FDF  DD RE+++   GV+ N  Q    
Sbjct: 167 LNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDF--DDIREDEE---GVTENGSQKTME 221

Query: 181 I-----EKRVYPVRLGKFRATD----GXXXXXXXXXXTSNSNLDARRCYSMGSYEYVVGN 333
           I     EK V PVRLGKF+  D    G          TS+SNLDARRC+SMGSY+Y++GN
Sbjct: 222 IQEIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGN 281

Query: 334 SELQVKFCPSRGNIGTKDDKDKGNSSVDGGIDGKKISSRSKGESFSVSKIWLWSKRDHHK 513
           SEL+V F   R       DK+   +      D KKI+S +KGESFSVSKIWLW K+D  K
Sbjct: 282 SELKVPFANDRLPRLKPQDKESEQTGNSSSEDNKKINSVAKGESFSVSKIWLWPKKD--K 339

Query: 514 FQDSSGTHMINSSVNV 561
           F   +   + +SS+NV
Sbjct: 340 FSSDAQRRLPSSSLNV 355


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
           gi|223539865|gb|EEF41445.1| ring finger protein,
           putative [Ricinus communis]
          Length = 374

 Score =  174 bits (442), Expect = 8e-42
 Identities = 108/212 (50%), Positives = 133/212 (62%), Gaps = 22/212 (10%)
 Frame = +1

Query: 1   IHCIDTWLLSNSSCPLCRGTLFTPEFSVENPVFDFHFDDSREEDDHVIGVSGNFKQSGGG 180
           I CIDTWLLSNS+CPLCRGTL+TP  S ENPVFD  F++SREE+    G+S N    G G
Sbjct: 168 IDCIDTWLLSNSTCPLCRGTLYTPGLSFENPVFD--FEESREEE----GLSSNV---GNG 218

Query: 181 I-------------EKRVYPVRLGKFRATDGXXXXXXXXXXTSNSNLDARRCYSMGSYEY 321
           I              KRV+ VRLGKF++++           TS+SNLDARRC+SMGSY+Y
Sbjct: 219 ISVGQKPAENERINSKRVFSVRLGKFKSSN-VEVDRVVEGETSSSNLDARRCFSMGSYQY 277

Query: 322 VVGNSELQVKFCPSRGNIGTKDDK-------DKGNSSVD--GGIDGKKISSRSKGESFSV 474
           VV +  LQV  CP R N+GT   K         GN+S +  G  +GKKI+ RSKGESFSV
Sbjct: 278 VVADLNLQVALCPGR-NVGTGSFKLVKSKNGQNGNTSSNDIGDAEGKKINIRSKGESFSV 336

Query: 475 SKIWLWSKRDHHKFQDSSGTHMINSSVNVSLP 570
           SKIW WS++   K   SS T+M +S + V LP
Sbjct: 337 SKIWQWSRKG--KLPSSSDTYMGSSPLAVGLP 366


>ref|XP_004142353.1| PREDICTED: RING-H2 finger protein ATL46-like [Cucumis sativus]
           gi|449492685|ref|XP_004159071.1| PREDICTED: RING-H2
           finger protein ATL46-like [Cucumis sativus]
          Length = 375

 Score =  174 bits (440), Expect = 1e-41
 Identities = 99/202 (49%), Positives = 130/202 (64%), Gaps = 12/202 (5%)
 Frame = +1

Query: 1   IHCIDTWLLSNSSCPLCRGTLFTPEFSVENPVFDFHFDDSREED------DHVIGVSGNF 162
           ++CIDTWLLSNS+CPLCRGTLF P FS+ENP++DF  DD  EED      DH +      
Sbjct: 169 VNCIDTWLLSNSTCPLCRGTLFNPGFSIENPMYDF--DDLGEEDECAGNADHRLPNCQKT 226

Query: 163 KQSGGGI-EKRVYPVRLGKFRATDGXXXXXXXXXXTSNSNLDARRCYSMGSYEYVVGNSE 339
            +    + EK V+PVRLGKFR  D           TS+SNLDARRCYSMGSY+YVV +++
Sbjct: 227 MEIQEVVNEKGVFPVRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDAD 286

Query: 340 LQVKFCPSRG----NIGTKDDKDKGNSSVDGGIDGKKISSRSKGESFSVSKIWLWSKRDH 507
           L++    +RG       +K+ +    S V   +DGKK+SS +KGES+SVSKIWLWSK+  
Sbjct: 287 LRIALSKARGEGDNTQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKG- 345

Query: 508 HKFQDSSGTHM-INSSVNVSLP 570
            K+  S+  H+ + SS+N  LP
Sbjct: 346 -KYSGSTEPHIGMPSSLNTDLP 366


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