BLASTX nr result

ID: Atractylodes22_contig00037447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037447
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28838.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...   113   1e-23
ref|XP_002321137.1| condensin complex components subunit [Populu...   111   7e-23
ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...    99   3e-19
ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...    97   2e-18

>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   SKQVDVQALKETLWSAMQE-TPGSAQETKTLSFKHMLASFPADKNKGVGAASIGVISPHL 178
           SKQVDVQALKETLW  MQ+ T  S ++ + +SF+H+LASFP        AA++  ISPHL
Sbjct: 573 SKQVDVQALKETLWGHMQKSTQSSVKDEEAVSFRHILASFPDHSR---AAAAMEDISPHL 629

Query: 179 CFICVLHLANEHGLSIHGCANLDDLSIHLPFE 274
           CFIC+LHLANEHGLSI+GCA+LDDLSIHLP +
Sbjct: 630 CFICLLHLANEHGLSINGCADLDDLSIHLPHD 661


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/97 (60%), Positives = 73/97 (75%), Gaps = 6/97 (6%)
 Frame = +2

Query: 2   SKQVDVQALKETLWSAMQETPGSAQET------KTLSFKHMLASFPADKNKGVGAASIGV 163
           SKQVDVQALKETLW  MQ++  S+ +       + +SF+H+LASFP        AA++  
Sbjct: 573 SKQVDVQALKETLWGHMQKSTQSSVKVSEYLDEEAVSFRHILASFPDHSR---AAAAMED 629

Query: 164 ISPHLCFICVLHLANEHGLSIHGCANLDDLSIHLPFE 274
           ISPHLCFIC+LHLANEHGLSI+GCA+LDDLSIHLP +
Sbjct: 630 ISPHLCFICLLHLANEHGLSINGCADLDDLSIHLPHD 666


>ref|XP_002321137.1| condensin complex components subunit [Populus trichocarpa]
           gi|222861910|gb|EEE99452.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 605

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   SKQVDVQALKETLWSAMQETPGSA--QETKTLSFKHMLASFPADKNKGVGAASIGVISPH 175
           SKQVDVQ LKETLW  +QE+P      + + +SF+ +LASFP+D      AA+I  ISPH
Sbjct: 517 SKQVDVQTLKETLWHHIQESPQMPVQDQEEAVSFRDLLASFPSDCR---AAATIKEISPH 573

Query: 176 LCFICVLHLANEHGLSIHGCANLDDLSIHLP 268
           LCFIC+LHLANEHGLSI GCA+L+DLSIH P
Sbjct: 574 LCFICLLHLANEHGLSIRGCASLNDLSIHFP 604


>ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 680

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   SKQVDVQALKETLWSAMQETPGSAQETK--TLSFKHMLASFPADKNKGVGAASIGVISPH 175
           SKQVDV ALK TLW  +QE+     E +  TLSFK++LA+FP++ N    AA+I  ISPH
Sbjct: 583 SKQVDVHALKITLWDHVQESVKLPLEGQKDTLSFKNILANFPSECN---AAATISDISPH 639

Query: 176 LCFICVLHLANEHGLSIHGCANLDDLSIHLP 268
           LCFIC+LHLANE GLSI   +NLDDL+I LP
Sbjct: 640 LCFICLLHLANEKGLSIQNSSNLDDLAIRLP 670


>ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Cucumis sativus] gi|449490353|ref|XP_004158580.1|
           PREDICTED: LOW QUALITY PROTEIN: condensin complex
           subunit 2-like [Cucumis sativus]
          Length = 667

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
 Frame = +2

Query: 2   SKQVDVQALKETLWSAMQETPGSAQET-------KTLSFKHMLASFPADKNKGVGAASIG 160
           SKQVDVQALKETLWS +QE+    + +       +  SFK +LA+FP D      A +I 
Sbjct: 572 SKQVDVQALKETLWSHLQESQTDTEVSXHAQLLYEMASFKQILATFPDDCR---AAQTIN 628

Query: 161 VISPHLCFICVLHLANEHGLSIHGCANLDDLSIH 262
            ISPHLCFIC+LHLANEHGLSI G  +L+DL+IH
Sbjct: 629 DISPHLCFICLLHLANEHGLSIKGSDHLNDLTIH 662