BLASTX nr result

ID: Atractylodes22_contig00037389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037389
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]   124   1e-26
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]   108   4e-22
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|...   104   8e-21
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]                    104   8e-21
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th...   102   2e-20

>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score =  124 bits (310), Expect = 1e-26
 Identities = 73/174 (41%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
 Frame = +3

Query: 3   IIEAINAWDDPISFPDLMEKLIQRELALKTQSILGTILATAHATITRPHHHQPTTHA-HS 179
           II+A+N  D  ISF +L EKLI +EL+L+ +     + A+AHAT  R      T      
Sbjct: 175 IIDAVNGRDSTISFDELHEKLINKELSLRNKISPSPLPASAHATNVRSTPWSVTNRTPRL 234

Query: 180 PNQQSR-NHSSDRNQNRTYSPNLNGSKPFLGRCQWCHTKGHSLQKCLVFLSKHPTIQPPP 356
           P   S       RN       N   + PFLGRCQWC T+GH + +C +F  + P +QPPP
Sbjct: 235 PGSTSAPTQGIIRNSPTNTRDNRPPAXPFLGRCQWCSTQGHVVSRCPLFXQQFPQVQPPP 294

Query: 357 LPTLSFKSP-----QAHVAQTSTTQFSHPWLLDSGASHHVTQDLANLSLHQPYD 503
            P  S +S      QA     +T   +  WLLDSGASHHVT DL NL+LH P+D
Sbjct: 295 RPGNSSQSRPPAPWQAQANVATTIPPNTTWLLDSGASHHVTTDLHNLALHXPFD 348


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score =  108 bits (270), Expect = 4e-22
 Identities = 62/157 (39%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
 Frame = +3

Query: 54  MEKLIQRELALKTQSILGTILATAHATITR--PHHHQPTTHAHSPNQQSRNHSSDRNQNR 227
           M+KLI +EL+L+ +    ++ A+AHAT  R  P      T     +  +      RN   
Sbjct: 24  MQKLINKELSLRNKISPSSLPASAHATNVRFTPWSVTNRTPRLPGSTSAPTQGIIRNSPT 83

Query: 228 TYSPNLNGSKPFLGRCQWCHTKGHSLQKCLVFLSKHPTIQPPPLPTLSFKSP-----QAH 392
               N + ++PFLGRCQWC T+GH + +C +F  + P +QPP  P  S +S      QA 
Sbjct: 84  NTRDNRSPARPFLGRCQWCSTQGHVVSRCPLFRQQFPQVQPPSRPGNSSQSRPPAPWQAQ 143

Query: 393 VAQTSTTQFSHPWLLDSGASHHVTQDLANLSLHQPYD 503
              T+T   +  WLLDSGASHHVT +L NL+LH P+D
Sbjct: 144 ANVTTTIPPNTTWLLDSGASHHVTTNLHNLALHSPFD 180


>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
           polyprotein [Arabidopsis thaliana]
           gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
           thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
           [Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
           polyprotein [Arabidopsis thaliana]
          Length = 1447

 Score =  104 bits (259), Expect = 8e-21
 Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
 Frame = +3

Query: 3   IIEAINAWDDPISFPDLMEKLIQRELALKTQSILGTILATAHATITRPHHHQPTTHAHSP 182
           +I+ I A D P +  ++ E+L+ +E  +   S    I  TA+A      H   TT  ++ 
Sbjct: 164 VIDQIAAKDTPPTLTEIHERLLNQESKILAVSSATVIPITANAV----SHRNTTTTTNNN 219

Query: 183 NQQSRNHSSDRNQNRT----------YSPNLNGSKPFLGRCQWCHTKGHSLQKCLV---F 323
           N    N   +RN N            + PN N SKP+LG+CQ C  +GHS ++C     F
Sbjct: 220 NGNRTNRYDNRNNNNNSKPWQQSSSNFRPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHF 279

Query: 324 LSKHPTIQPPPLPTLSFKSPQAHVAQTSTTQFSHPWLLDSGASHHVTQDLANLSLHQPY 500
           LS   + QPP   TL    P+A++A  S    S+ WLLDSGA+HH+T D  NLSLHQPY
Sbjct: 280 LSSVNSQQPPSPFTLW--QPRANLALGSPYS-SNSWLLDSGATHHITSDFNNLSLHQPY 335


>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
          Length = 1447

 Score =  104 bits (259), Expect = 8e-21
 Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
 Frame = +3

Query: 3   IIEAINAWDDPISFPDLMEKLIQRELALKTQSILGTILATAHATITRPHHHQPTTHAHSP 182
           +I+ I A D P +  ++ E+L+ +E  +   S    I  TA+A      H   TT  ++ 
Sbjct: 164 VIDQIAAKDTPPTLTEIHERLLNQESKILAVSSATVIPITANAV----SHRNTTTTTNNN 219

Query: 183 NQQSRNHSSDRNQNRT----------YSPNLNGSKPFLGRCQWCHTKGHSLQKCLV---F 323
           N    N   +RN N            + PN N SKP+LG+CQ C  +GHS ++C     F
Sbjct: 220 NGNRTNRYDNRNNNNNSKPWQQSSSNFRPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHF 279

Query: 324 LSKHPTIQPPPLPTLSFKSPQAHVAQTSTTQFSHPWLLDSGASHHVTQDLANLSLHQPY 500
           LS   + QPP   TL    P+A++A  S    S+ WLLDSGA+HH+T D  NLSLHQPY
Sbjct: 280 LSSVNSQQPPSPFTLW--QPRANLALGSPYS-SNSWLLDSGATHHITSDFNNLSLHQPY 335


>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
          Length = 847

 Score =  102 bits (255), Expect = 2e-20
 Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
 Frame = +3

Query: 3   IIEAINAWDDPISFPDLMEKLIQRELALKTQSILGTILATAHATITRPHHHQPTTHAHSP 182
           +I+ I A D P +  ++ E+L+  E  +   S    I  TA+A      H   TT  ++ 
Sbjct: 148 VIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAV----SHRNTTTTTNNN 203

Query: 183 NQQSRNHSSDRNQNRT----------YSPNLNGSKPFLGRCQWCHTKGHSLQKC--LVFL 326
           N    N   +RN N            + PN N SKP+LG+CQ C  +GHS ++C  L   
Sbjct: 204 NGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHF 263

Query: 327 SKHPTIQPPPLPTLSFKSPQAHVAQTSTTQFSHPWLLDSGASHHVTQDLANLSLHQPY 500
                 Q PP P   ++ P+A++A  S    S+ WLLDSGA+HH+T D  NLSLHQPY
Sbjct: 264 LSSVNSQQPPSPFTPWQ-PRANLALGSPYS-SNNWLLDSGATHHITSDFNNLSLHQPY 319


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