BLASTX nr result
ID: Atractylodes22_contig00037299
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00037299
(648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago trun... 162 2e-64
ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arab... 182 3e-61
prf||1011228A cytochrome b559 237 1e-60
ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago trun... 182 4e-44
ref|YP_398346.1| photosystem II protein V [Lactuca sativa] gi|94... 171 1e-40
>ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago truncatula]
gi|355507070|gb|AES88212.1| Cytochrome b559 subunit
alpha [Medicago truncatula]
Length = 136
Score = 162 bits (411), Expect(2) = 2e-64
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +3
Query: 6 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR 185
MSGSTGERSFADIITSIRYW+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE+R
Sbjct: 1 MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 186 QGIPLITGRFDSLEQLDEFSR 248
QGIPLITGRFDSLEQLDEF R
Sbjct: 61 QGIPLITGRFDSLEQLDEFIR 81
Score = 109 bits (272), Expect(2) = 2e-64
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = +1
Query: 355 QYQQCSSYNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 522
++ QCSS NDKPNPNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 81 RWLQCSSSNDKPNPNYRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 136
>ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arabidopsis lyrata subsp.
lyrata] gi|297334219|gb|EFH64637.1| hypothetical protein
ARALYDRAFT_894035 [Arabidopsis lyrata subsp. lyrata]
Length = 136
Score = 182 bits (462), Expect(2) = 3e-61
Identities = 93/119 (78%), Positives = 98/119 (82%)
Frame = +3
Query: 6 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR 185
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE+R
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 186 QGIPLITGRFDSLEQLDEFSRSF*EASMTIDRTYPIFTVRWLAVHGLAVPTVFFLGSIS 362
QGIPLITGRFD LEQLDEF +RWLAVHGLAVPTV FLG+++
Sbjct: 61 QGIPLITGRFDPLEQLDEF-------------------MRWLAVHGLAVPTVSFLGAMT 100
Score = 79.0 bits (193), Expect(2) = 3e-61
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +1
Query: 406 AMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 522
AMTQSNPNEQ+VELNRTSLYWGLL IFVLAVLFSNYFFN
Sbjct: 98 AMTQSNPNEQSVELNRTSLYWGLLFIFVLAVLFSNYFFN 136
>prf||1011228A cytochrome b559
Length = 122
Score = 237 bits (605), Expect = 1e-60
Identities = 119/126 (94%), Positives = 121/126 (96%)
Frame = +3
Query: 6 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR 185
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE+R
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 186 QGIPLITGRFDSLEQLDEFSRSF*EASMTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISA 365
QGIPLITGRFDSLEQLDEFSRSF MTIDRTYPIFTVRWLA+HGLAVPTV FLGSISA
Sbjct: 61 QGIPLITGRFDSLEQLDEFSRSF----MTIDRTYPIFTVRWLAIHGLAVPTVSFLGSISA 116
Query: 366 MQFIQR 383
MQFIQR
Sbjct: 117 MQFIQR 122
>ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago truncatula]
gi|355506644|gb|AES87786.1| Cytochrome b559 subunit
alpha [Medicago truncatula]
Length = 153
Score = 182 bits (463), Expect = 4e-44
Identities = 92/114 (80%), Positives = 95/114 (83%)
Frame = +3
Query: 6 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR 185
MSGSTGERSFADIITSIRYW+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE+R
Sbjct: 1 MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60
Query: 186 QGIPLITGRFDSLEQLDEFSRSF*EASMTIDRTYPIFTVRWLAVHGLAVPTVFF 347
QGIPLITGRFDSLEQLDEF +RWLAVHGLAVPTVFF
Sbjct: 61 QGIPLITGRFDSLEQLDEF-------------------IRWLAVHGLAVPTVFF 95
Score = 127 bits (320), Expect = 1e-27
Identities = 62/72 (86%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Frame = +1
Query: 310 WLFTA*LYLP-FFFWGQYQQCSSYNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIF 486
WL L +P FFW QYQQCSS NDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIF
Sbjct: 82 WLAVHGLAVPTVFFWDQYQQCSSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIF 141
Query: 487 VLAVLFSNYFFN 522
VLAVLFSNYFFN
Sbjct: 142 VLAVLFSNYFFN 153
>ref|YP_398346.1| photosystem II protein V [Lactuca sativa]
gi|94502508|ref|YP_588134.1| photosystem II protein V
[Helianthus annuus] gi|183217758|ref|YP_001837377.1|
photosystem II protein V [Guizotia abyssinica]
gi|334701819|ref|YP_004564389.1| photosystem II
cytochrome b559 alpha subunit (chloroplast) [Ageratina
adenophora] gi|334702341|ref|YP_004465204.1| photosystem
II cytochrome b559 alpha subunit [Jacobaea vulgaris]
gi|342316138|ref|YP_004769647.1| photosystem II
cytochrome b559 alpha subunit (chloroplast) [Spirodela
polyrhiza] gi|342316307|ref|YP_004769829.1| photosystem
II cytochrome b559 alpha subunit (chloroplast)
[Wolffiella lingulata] gi|374249721|ref|YP_005089351.1|
psbE gene product (chloroplast) [Silene vulgaris]
gi|374249804|ref|YP_005089432.1| psbE gene product
(chloroplast) [Silene noctiflora]
gi|374249885|ref|YP_005089513.1| psbE gene product
(chloroplast) [Silene conica]
gi|374249967|ref|YP_005089594.1| psbE gene product
(chloroplast) [Silene latifolia]
gi|377819395|ref|YP_005097891.1| photosystem II protein
V (chloroplast) [Colocasia esculenta]
gi|441403309|ref|YP_007353783.1| photosystem II protein
V (chloroplast) [Chrysanthemum x morifolium]
gi|452849068|ref|YP_007474746.1| photosystem II protein
V (chloroplast) [Chrysanthemum indicum]
gi|94730455|sp|Q332W1.1|PSBE_LACSA RecName:
Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
reaction center subunit V
gi|122179565|sp|Q1KXU2.1|PSBE_HELAN RecName:
Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
reaction center subunit V gi|78675185|dbj|BAE47611.1|
cytochrome b559 component alpha chain [Lactuca sativa]
gi|88656912|gb|ABD47163.1| photosystem II cytochrome
b559 alpha subunit [Helianthus annuus]
gi|88657000|gb|ABD47250.1| photosystem II cytochrome
b559 alpha subunit [Lactuca sativa]
gi|156598618|gb|ABU85565.1| photosystem II cytochrome
b559 alpha subunit [Scaevola aemula]
gi|166235542|gb|ABY85457.1| PSII reaction centre subunit
V [Silene chalcedonica] gi|166235564|gb|ABY85478.1| PSII
reaction centre subunit V [Silene samia]
gi|166235608|gb|ABY85520.1| PSII reaction centre subunit
V [Silene uniflora] gi|166235630|gb|ABY85541.1| PSII
reaction centre subunit V [Silene zawadskii]
gi|166235652|gb|ABY85562.1| PSII reaction centre subunit
V [Silene sorensenis] gi|166235674|gb|ABY85583.1| PSII
reaction centre subunit V [Silene integripetala]
gi|166235696|gb|ABY85604.1| PSII reaction centre subunit
V [Silene conica] gi|166235718|gb|ABY85625.1| PSII
reaction centre subunit V [Silene latifolia]
gi|166235740|gb|ABY85646.1| PSII reaction centre subunit
V [Silene cryptoneura] gi|166235762|gb|ABY85667.1| PSII
reaction centre subunit V [Silene sordida]
gi|166235784|gb|ABY85688.1| PSII reaction centre subunit
V [Silene fruticosa] gi|166235806|gb|ABY85709.1| PSII
reaction centre subunit V [Silene pseudoatocion]
gi|166235828|gb|ABY85730.1| PSII reaction centre subunit
V [Silene schafta] gi|166235850|gb|ABY85751.1| PSII
reaction centre subunit V [Silene aegyptiaca]
gi|166239991|gb|ABY86518.1| PSII reaction centre subunit
V [Heliosperma alpestre] gi|179366273|gb|ACB86544.1|
photosystem II cytochrome b559 alpha subunit [Guizotia
abyssinica] gi|255709073|gb|ACU30445.1| PSII reaction
center subunit V [Silene noctiflora]
gi|308156099|gb|ADO15427.1| photosystem II cytochrome
b559 alpha subunit [Jacobaea vulgaris]
gi|329755456|gb|AEC04020.1| photosystem II cytochrome
b559 alpha subunit (chloroplast) [Silene conica]
gi|329755538|gb|AEC04101.1| photosystem II cytochrome
b559 alpha subunit (chloroplast) [Silene latifolia]
gi|329755621|gb|AEC04183.1| photosystem II cytochrome
b559 alpha subunit (chloroplast) [Silene noctiflora]
gi|329755703|gb|AEC04264.1| photosystem II cytochrome
b559 alpha subunit (chloroplast) [Silene vulgaris]
gi|334089690|gb|AEG64573.1| photosystem II cytochrome
b559 alpha subunit (chloroplast) [Ageratina adenophora]
gi|340536656|gb|AEK48423.1| photosystem II protein V
(chloroplast) [Colocasia esculenta]
gi|340536743|gb|AEK48509.1| photosystem II protein V
(chloroplast) [Colocasia esculenta]
gi|341834088|gb|AEK94359.1| photosystem II cytochrome
b559 alpha subunit [Spirodela polyrhiza]
gi|341834172|gb|AEK94442.1| photosystem II cytochrome
b559 alpha subunit [Wolffiella lingulata]
gi|372483896|gb|AEX95590.1| photosystem II cytochrome
b559 alpha subunit (chloroplast) [Aphyllanthes
monspeliensis] gi|372863223|gb|AEX99295.1| photosystem
II protein V (chloroplast) [Chrysanthemum indicum]
gi|372863462|gb|AEX99531.1| photosystem II protein V
(chloroplast) [Chrysanthemum indicum]
gi|375298852|gb|AFA45291.1| photosystem II protein V
(chloroplast) [Chrysanthemum x morifolium]
Length = 83
Score = 171 bits (433), Expect = 1e-40
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +3
Query: 6 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR 185
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENR 60
Query: 186 QGIPLITGRFDSLEQLDEFSRSF 254
QGIPLITGRFDSLEQLDEFSRSF
Sbjct: 61 QGIPLITGRFDSLEQLDEFSRSF 83