BLASTX nr result

ID: Atractylodes22_contig00037281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037281
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...    61   8e-08
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...    61   1e-07
emb|CBI15710.3| unnamed protein product [Vitis vinifera]               61   1e-07
gb|AFK47408.1| unknown [Medicago truncatula]                           60   1e-07
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul...    60   1e-07

>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 385

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -2

Query: 372 VHPRDQYRKNTVVGILQAKHDLAPLFPIHRLD 277
           VHP  QYRKNTVVGILQA+H+LAPLFP+HRLD
Sbjct: 138 VHPCGQYRKNTVVGILQAEHNLAPLFPVHRLD 169


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis
           vinifera] gi|359491114|ref|XP_002280549.2| PREDICTED:
           RNA pseudourine synthase 7-like isoform 1 [Vitis
           vinifera]
          Length = 386

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -2

Query: 372 VHPRDQYRKNTVVGILQAKHDLAPLFPIHRLD 277
           VHP  QYRKNTVVGILQA+H LAPLFPIHRLD
Sbjct: 136 VHPCGQYRKNTVVGILQAEHGLAPLFPIHRLD 167


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -2

Query: 372 VHPRDQYRKNTVVGILQAKHDLAPLFPIHRLD 277
           VHP  QYRKNTVVGILQA+H LAPLFPIHRLD
Sbjct: 126 VHPCGQYRKNTVVGILQAEHGLAPLFPIHRLD 157


>gb|AFK47408.1| unknown [Medicago truncatula]
          Length = 268

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -2

Query: 372 VHPRDQYRKNTVVGILQAKHDLAPLFPIHRLD 277
           VHP  QYRKNTVVGILQA+H LAPLFP+HRLD
Sbjct: 25  VHPCGQYRKNTVVGILQAEHGLAPLFPVHRLD 56


>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355491829|gb|AES73032.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 380

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -2

Query: 372 VHPRDQYRKNTVVGILQAKHDLAPLFPIHRLD 277
           VHP  QYRKNTVVGILQA+H LAPLFP+HRLD
Sbjct: 137 VHPCGQYRKNTVVGILQAEHGLAPLFPVHRLD 168


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