BLASTX nr result

ID: Atractylodes22_contig00037248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037248
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...   275   2e-71
ref|XP_002511433.1| ring finger protein, putative [Ricinus commu...   269   9e-70
ref|XP_002517366.1| ring finger protein, putative [Ricinus commu...   263   8e-68
ref|XP_002298515.1| predicted protein [Populus trichocarpa] gi|2...   262   1e-67
ref|XP_004152548.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   258   2e-66

>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score =  275 bits (703), Expect = 2e-71
 Identities = 166/346 (47%), Positives = 206/346 (59%), Gaps = 49/346 (14%)
 Frame = +1

Query: 157  LSQEDGISVQLSAPSEIT---ISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVS 327
            LS  D    + S PS  +   ISPA+L++IV +A IFFISG+LH+++RF+ K ++  S+S
Sbjct: 33   LSSYDSNYQKESTPSPSSGSRISPAVLFIIVILAVIFFISGLLHLLVRFLVKHRSSSSIS 92

Query: 328  QSNRYSELHRPXXXXXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCE 507
            QSNRY E                  DSGLDQ+FID+LPVF YKD+ GLK+PFDCAVCLCE
Sbjct: 93   QSNRYQETSSSHAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKDIVGLKEPFDCAVCLCE 152

Query: 508  FSPHDKLRLIPICSHAFHTRCIDTWLVSNSTCPLCR-----VNLSMESSSCNHNGPR-EN 669
            FS  DKLRL+P+CSHAFH  CIDTWL+SNSTCPLCR       L+ME+S  +    R E 
Sbjct: 153  FSQEDKLRLLPMCSHAFHIECIDTWLLSNSTCPLCRGTLFNPGLAMENSVFDFEDSREEG 212

Query: 670  LMNVSTNSIASEMGCEEKNLG--KRVLSVRLGKLKSLNAG-------------------E 786
             ++ + + ++S     E ++   KRV SVRLGK + LN G                    
Sbjct: 213  GLSSNGDGVSSAQKPPEDDIASEKRVFSVRLGKFRGLNGGGGGGGGGGGGGGGGEGEGEG 272

Query: 787  RSNGGEISRCNLDARRCFSMGSFQYVVHNTDLQVALFNVKENVGC--------------- 921
               GGE S  NLDARRCFSMGSFQYVV N+DLQVAL   + + G                
Sbjct: 273  ERGGGETSCSNLDARRCFSMGSFQYVVANSDLQVALCPNRADAGSDAVVKLMKGRGGHTG 332

Query: 922  GESDDNSMEQGKI----KYESFSVSKVWLWSKQGKFPVSSSDAEVG 1047
              S D  +E  KI    K ESFSVSK+WLW K+GKFP SSSD  +G
Sbjct: 333  NSSTDGDVEGKKISIGSKDESFSVSKIWLWPKKGKFP-SSSDTHIG 377


>ref|XP_002511433.1| ring finger protein, putative [Ricinus communis]
            gi|223550548|gb|EEF52035.1| ring finger protein, putative
            [Ricinus communis]
          Length = 354

 Score =  269 bits (688), Expect = 9e-70
 Identities = 147/313 (46%), Positives = 202/313 (64%), Gaps = 23/313 (7%)
 Frame = +1

Query: 163  QEDGISVQLSAPSEITISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVSQSNRY 342
            ++D      S+ S   ISP +L VI+ +A IFF+SG+LH+++R + K+  + ++  SNRY
Sbjct: 34   EDDSTLASSSSSSFNRISPVILLVIIILAVIFFVSGVLHLLVRCLLKRSHFSAIFHSNRY 93

Query: 343  SELHRPXXXXXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCEFSPHD 522
             E+ R               DSGLDQ+F+D+LPVF YKD+ GLK+PFDCAVCLCEFS  D
Sbjct: 94   PEISRSHSLQRQLQQLFRQHDSGLDQAFVDALPVFYYKDIMGLKEPFDCAVCLCEFSDRD 153

Query: 523  KLRLIPICSHAFHTRCIDTWLVSNSTCPLCR-----VNLSMESSSCN-------HNG-PR 663
            +LRL+P+CSHAFH  CIDTWL+SNSTCPLCR      +L ME+ S N        NG P 
Sbjct: 154  RLRLLPMCSHAFHIHCIDTWLLSNSTCPLCRGTLLSSSLPMENPSFNFDVLREVSNGLPS 213

Query: 664  ENLMNVSTNSIASEMGCEEKNLGKRVLSVRLGKLKSLNAGERS--NGGEISRCNLDARRC 837
            +   + S+N   + +  EE  + KRV SVRLGK +SLN GE S   G E +R NLDARRC
Sbjct: 214  DGDNDGSSNGQKTGITTEESVVEKRVFSVRLGKFRSLNEGETSGERGREETRSNLDARRC 273

Query: 838  FSMGSFQYVVHNTDLQVALFNVKENVGCGESDDNSME--------QGKIKYESFSVSKVW 993
            +S+G+ QYVV +++LQVAL +       GE + ++++         G+ + +SFSVSK+W
Sbjct: 274  YSLGTVQYVVGDSNLQVALSHHDSINVRGEYESSAVDGDVEGKKINGRTRGDSFSVSKIW 333

Query: 994  LWSKQGKFPVSSS 1032
            LWSK+ KFP S++
Sbjct: 334  LWSKKNKFPSSTT 346


>ref|XP_002517366.1| ring finger protein, putative [Ricinus communis]
            gi|223543377|gb|EEF44908.1| ring finger protein, putative
            [Ricinus communis]
          Length = 376

 Score =  263 bits (671), Expect = 8e-68
 Identities = 158/318 (49%), Positives = 203/318 (63%), Gaps = 28/318 (8%)
 Frame = +1

Query: 190  SAPSE--ITISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVSQSN-RYSELHRP 360
            S+PS     ISPA+L++IV +A +FFISG+LH+++RF+ K  +  + SQSN RY E+  P
Sbjct: 46   SSPSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSSSASSQSNNRYPEISGP 105

Query: 361  XXXXXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCEFSPHDKLRLIP 540
                          DSGLDQ+FID+LPVF Y+++ GLK+PFDCAVCLCEF+  DKLRL+P
Sbjct: 106  DALQRQLQQLFHLHDSGLDQAFIDALPVFQYREIVGLKEPFDCAVCLCEFTEKDKLRLLP 165

Query: 541  ICSHAFHTRCIDTWLVSNSTCPLCRVNL-----SMESSSCNHNGPREN--LMNVSTNSIA 699
            +CSHAFH  CIDTWL+SNSTCPLCR  L     S+E+   + +  REN        N   
Sbjct: 166  VCSHAFHINCIDTWLLSNSTCPLCRGTLFTPGFSIENPMFDFDDLRENDGYPGSGENGFP 225

Query: 700  SE---MGCEEKN-LGKRVLSVRLGKLKSLNAGERSNGGEISRCNLDARRCFSMGSFQYVV 867
            +    M  EE   + K VL VRLGK + L  G    GGE S  NLDARRCFSMGS+QYV+
Sbjct: 226  ASQKIMEIEEPAVIEKGVLPVRLGKFRRLTDGTGEAGGETSSSNLDARRCFSMGSYQYVL 285

Query: 868  HNTDLQVALF------NVKENVGCGESD----DNSMEQGKI----KYESFSVSKVWLWSK 1005
             ++DL+VAL       +VK   G  ++     D  +E  KI    K ESFSVSK+WLWSK
Sbjct: 286  GDSDLRVALCTDRHARSVKPEKGNDQNGSVLVDGDLEGKKISRVTKRESFSVSKIWLWSK 345

Query: 1006 QGKFPVSSSDAEVGGVSS 1059
            +GKF  SS+DA++G  SS
Sbjct: 346  KGKFS-SSTDAQMGMPSS 362


>ref|XP_002298515.1| predicted protein [Populus trichocarpa] gi|222845773|gb|EEE83320.1|
            predicted protein [Populus trichocarpa]
          Length = 318

 Score =  262 bits (670), Expect = 1e-67
 Identities = 156/312 (50%), Positives = 196/312 (62%), Gaps = 26/312 (8%)
 Frame = +1

Query: 190  SAPSEITISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVSQSNRYSELHRPXXX 369
            S PS   ISPA+L+VIV +A +FFISG+LH+++RF+ K     + SQSNRY E+      
Sbjct: 5    SPPSASLISPAVLFVIVILAVLFFISGLLHLLIRFLIKHPTSSAASQSNRYPEISGSDAL 64

Query: 370  XXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCEFSPHDKLRLIPICS 549
                       DSGLDQ+FID+LPVF YK++ G K+PFDC VCLCEFS  DKLRL+P+CS
Sbjct: 65   QRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGPKEPFDCPVCLCEFSEKDKLRLLPMCS 124

Query: 550  HAFHTRCIDTWLVSNSTCPLCRVNL------SMESSSCNHNGPRENLMNVSTNSI----A 699
            HAFH  CIDTWL+SNSTCPLCR  L      SME+   + +  RE+        I    +
Sbjct: 125  HAFHINCIDTWLLSNSTCPLCRGTLFNTAGFSMENPMFDFDDLREDDECPGDGDIVFIPS 184

Query: 700  SEMG-CEEKNLGKRVLSVRLGKLKSLNAGERSNGGEISRCNLDARRCFSMGSFQYVVHNT 876
             + G  E   + K VL VRLGK + LN G    GGE S  NLDARRCFSMGS+QYV+ +T
Sbjct: 185  QKTGEIEGTVVEKGVLPVRLGKFRKLNGGVGEAGGETSSSNLDARRCFSMGSYQYVLGDT 244

Query: 877  DLQVALFN------VKENVGCGE----SDDNSMEQGKI----KYESFSVSKVWLW-SKQG 1011
            DL+V L N      +K   G  +    S D  +E+ KI    + ESFSVSK+WLW +K+G
Sbjct: 245  DLRVGLSNERQSRDIKPARGTEQKVNLSVDGDLEENKISSLSQGESFSVSKIWLWRNKKG 304

Query: 1012 KFPVSSSDAEVG 1047
            KF  SSSDA +G
Sbjct: 305  KFS-SSSDAPMG 315


>ref|XP_004152548.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL46-like
            [Cucumis sativus]
          Length = 349

 Score =  258 bits (659), Expect = 2e-66
 Identities = 151/301 (50%), Positives = 191/301 (63%), Gaps = 20/301 (6%)
 Frame = +1

Query: 190  SAPSEITISPALLWVIVSVAAIFFISGILHVVLRFMKKKQAYPSVSQSNRYSELHRPXXX 369
            S+ S  +ISP LL VIV +A IFFISG+LH+++RF+ K+ + PS+ QSNRY+E       
Sbjct: 41   SSSSFSSISPILLLVIVILAVIFFISGLLHLLVRFLLKRSS-PSIYQSNRYAERPGSHTL 99

Query: 370  XXXXXXXXXXXDSGLDQSFIDSLPVFDYKDVSGLKDPFDCAVCLCEFSPHDKLRLIPICS 549
                       DSGLDQ+FID+LPVF YKD+ GLK+PFDCAVCL EFS  D+LRL+PICS
Sbjct: 100  QRQLQQLFRLHDSGLDQTFIDALPVFLYKDIMGLKEPFDCAVCLYEFSDQDRLRLLPICS 159

Query: 550  HAFHTRCIDTWLVSNSTCPLCRVNL---SMESSSCN--------HNGPRENLMNVSTNSI 696
            HAFH  CIDTWL+SNSTCPLCR  L   S  S + N        HN  R+    VS N  
Sbjct: 160  HAFHISCIDTWLLSNSTCPLCRATLLGSSFPSENPNLNEIFGQEHNYHRQPENTVSGNHQ 219

Query: 697  ASEMGCEEKNLGK-RVLSVRLGKLKSLNAGE------RSNGGEISRCNLDARRCFSMGSF 855
                   E++ G+ RVLSVRLGK K LN  +         G   S+ NL+ARRC+SMG++
Sbjct: 220  KRVTTTMEESAGEMRVLSVRLGKFKKLNKEDDDDDEIEEKGESSSQNNLNARRCYSMGTY 279

Query: 856  QYVVHNTDLQV--ALFNVKENVGCGESDDNSMEQGKIKYESFSVSKVWLWSKQGKFPVSS 1029
            QYVV  +DLQV     N++   G GE D   +  G+ K ESFSVSK+W WSK+ + P++S
Sbjct: 280  QYVVGESDLQVMKEKLNIENVRGNGEMDGKKI-SGRSKGESFSVSKIWQWSKKSELPITS 338

Query: 1030 S 1032
            S
Sbjct: 339  S 339


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