BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037225
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-56
ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-56
ref|XP_003592711.1| Pentatricopeptide repeat-containing protein ...   220   8e-56
ref|XP_002515972.1| pentatricopeptide repeat-containing protein,...   218   5e-55
ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55

>ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 442

 Score =  223 bits (569), Expect = 1e-56
 Identities = 108/158 (68%), Positives = 132/158 (83%)
 Frame = +1

Query: 1   LFDEMPNKNLVSWNSMLDCYVKCREVLLAREVFDLMPERDVVSWSSMIDGYVKGSEYSEA 180
           +FDEMP KNLV+WN+MLD Y KC ++ +AREVF+LMPE+DVVSWSS+IDGYVKG  Y EA
Sbjct: 170 VFDEMPRKNLVTWNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEA 229

Query: 181 LAIFQKMNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDM 360
           +A+F++M+  G  ANEVT+VS L ACAHLGALE G MMHRYIV+ ++ LT+VL+TSLVDM
Sbjct: 230 MALFERMSFDGPMANEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDM 289

Query: 361 YAKCGAIEDALAVFRGTLAKQTDVLI*NAMIGGLATHG 474
           YAKCGAI +AL VFR    ++ DVLI NA+IGGLATHG
Sbjct: 290 YAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLATHG 327



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
 Frame = +1

Query: 7   DEMPNKNLVSWNSMLDCYVKCREVLLAREVFDL--MPERDVVSWSSMIDGYVKGSEYSEA 180
           +E+P   +V   S++D Y KC  +  A  VF    + E DV+ W+++I G        EA
Sbjct: 274 NELP-LTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLATHGLIKEA 332

Query: 181 LAIFQKMNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDM 360
           + +F +M   G+  +E+T + +L  CAH G +E+       +    +   +     +VD 
Sbjct: 333 MNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFDCLRKHGMIPKVEHYACMVDA 392

Query: 361 YAKCGAIEDALAVFRGTLAKQTDVLI*NAMIGGLATHG 474
            ++ G + +A         + T  ++  A++ G   HG
Sbjct: 393 LSRAGQVSEAYQFLCQMPVQPTSSML-GALLSGCMKHG 429


>ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 542

 Score =  223 bits (569), Expect = 1e-56
 Identities = 108/158 (68%), Positives = 132/158 (83%)
 Frame = +1

Query: 1   LFDEMPNKNLVSWNSMLDCYVKCREVLLAREVFDLMPERDVVSWSSMIDGYVKGSEYSEA 180
           +FDEMP KNLV+WN+MLD Y KC ++ +AREVF+LMPE+DVVSWSS+IDGYVKG  Y EA
Sbjct: 170 VFDEMPRKNLVTWNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEA 229

Query: 181 LAIFQKMNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDM 360
           +A+F++M+  G  ANEVT+VS L ACAHLGALE G MMHRYIV+ ++ LT+VL+TSLVDM
Sbjct: 230 MALFERMSFDGPMANEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDM 289

Query: 361 YAKCGAIEDALAVFRGTLAKQTDVLI*NAMIGGLATHG 474
           YAKCGAI +AL VFR    ++ DVLI NA+IGGLATHG
Sbjct: 290 YAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLATHG 327



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
 Frame = +1

Query: 7   DEMPNKNLVSWNSMLDCYVKCREVLLAREVFDL--MPERDVVSWSSMIDGYVKGSEYSEA 180
           +E+P   +V   S++D Y KC  +  A  VF    + E DV+ W+++I G        EA
Sbjct: 274 NELP-LTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLATHGLIKEA 332

Query: 181 LAIFQKMNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDM 360
           + +F +M   G+  +E+T + +L  CAH G +E+       +    +   +     +VD 
Sbjct: 333 MNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFDCLRKHGMIPKVEHYACMVDA 392

Query: 361 YAKCGAIEDALAVFRGTLAKQTDVLI*NAMIGGLATHG 474
            ++ G + +A         + T  ++  A++ G   HG
Sbjct: 393 LSRAGQVSEAYQFLCQMPVQPTSSML-GALLSGCMKHG 429


>ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481759|gb|AES62962.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  220 bits (561), Expect = 8e-56
 Identities = 108/158 (68%), Positives = 127/158 (80%)
 Frame = +1

Query: 1   LFDEMPNKNLVSWNSMLDCYVKCREVLLAREVFDLMPERDVVSWSSMIDGYVKGSEYSEA 180
           +F+ M  KNLVSWNSMLD Y KC E+ +A++VF+ M ERDV SWSS IDGYVK  EY EA
Sbjct: 171 VFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREA 230

Query: 181 LAIFQKMNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDM 360
           +A+F+KM   G  ANEVTMVSVL ACAHLGAL++G MMH+YI+D  + +T+VL+TSLVDM
Sbjct: 231 MAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDM 290

Query: 361 YAKCGAIEDALAVFRGTLAKQTDVLI*NAMIGGLATHG 474
           YAKCGAIE+AL VFRG    QTDV I NAMIGGLATHG
Sbjct: 291 YAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHG 328



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
 Frame = +1

Query: 1   LFDEMPNKNLVSWNSMLDCYVKCREVLLAREVFDLMP--ERDVVSWSSMIDGYVKGSEYS 174
           + D +    +V   S++D Y KC  +  A  VF  +   + DV  W++MI G        
Sbjct: 272 IIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVE 331

Query: 175 EALAIFQKMNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLV 354
           E+L +F++M  +G+ ++E+T + +L ACAH G +++       +V + +  T      +V
Sbjct: 332 ESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKRGMTPTSEHYACMV 391

Query: 355 DMYAKCGAIEDA 390
           D+ A+ G +  A
Sbjct: 392 DVLARAGQLTTA 403



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 38/127 (29%), Positives = 60/127 (47%)
 Frame = +1

Query: 94  VFDLMPERDVVSWSSMIDGYVKGSEYSEALAIFQKMNGSGVNANEVTMVSVLGACAHLGA 273
           VF  +    + SW+ +I GY        +L+IF KM   GV  + +T   ++ A A L  
Sbjct: 70  VFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSK 129

Query: 274 LEQGIMMHRYIVDKKIALTLVLRTSLVDMYAKCGAIEDALAVFRGTLAKQTDVLI*NAMI 453
            + G+ +H  I+         ++ SL+ MYA CG I  A  VF     K  +++  N+M+
Sbjct: 130 QKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGK--NLVSWNSML 187

Query: 454 GGLATHG 474
            G A  G
Sbjct: 188 DGYAKCG 194


>ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544877|gb|EEF46392.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  218 bits (554), Expect = 5e-55
 Identities = 106/158 (67%), Positives = 128/158 (81%)
 Frame = +1

Query: 1   LFDEMPNKNLVSWNSMLDCYVKCREVLLAREVFDLMPERDVVSWSSMIDGYVKGSEYSEA 180
           +FD MP KNLVSWNSM+D   KC  ++LAR++FDLMP+RDV+SWSS+IDGYVK  +Y +A
Sbjct: 171 VFDGMPVKNLVSWNSMVDGSAKCGNMVLARQLFDLMPDRDVLSWSSLIDGYVKNGDYGDA 230

Query: 181 LAIFQKMNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDM 360
           + +F KM  SG   NEVTMVSVL ACAHLGAL++G MMH Y++D K+ LTLVL TSLVDM
Sbjct: 231 MVVFDKMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNKLPLTLVLCTSLVDM 290

Query: 361 YAKCGAIEDALAVFRGTLAKQTDVLI*NAMIGGLATHG 474
           YAKCGAI +A  VFRG  A+ +DVL+ NAMIGGLATHG
Sbjct: 291 YAKCGAINEAFDVFRGIPAELSDVLLWNAMIGGLATHG 328



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
 Frame = +1

Query: 28  LVSWNSMLDCYVKCREVLLAREVFDLMPER--DVVSWSSMIDGYVKGSEYSEALAIFQKM 201
           LV   S++D Y KC  +  A +VF  +P    DV+ W++MI G        E+L +F++M
Sbjct: 281 LVLCTSLVDMYAKCGAINEAFDVFRGIPAELSDVLLWNAMIGGLATHGLVKESLDLFKEM 340

Query: 202 NGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDMYAKCGAI 381
           N  GV  +E+T +S+L ACAH G +++       +    + L +     +VD+ A+ G I
Sbjct: 341 NFVGVKPDEITYLSLLHACAHGGLVKEAWYFFDCLGKHGMTLKIEHYACIVDVMARAGQI 400

Query: 382 EDA 390
             A
Sbjct: 401 AKA 403


>ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|222852973|gb|EEE90520.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  217 bits (553), Expect = 7e-55
 Identities = 107/158 (67%), Positives = 126/158 (79%)
 Frame = +1

Query: 1   LFDEMPNKNLVSWNSMLDCYVKCREVLLAREVFDLMPERDVVSWSSMIDGYVKGSEYSEA 180
           +FD  P KNLVSWNSM+D Y KC  + LAR +FDLMPERDV SWS +IDGY K   Y +A
Sbjct: 67  VFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDA 126

Query: 181 LAIFQKMNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDM 360
           +A+F+KM  SG  ANEVTMVSVL ACAHLGAL++G MMH+Y+VD    L LVLRTSL+DM
Sbjct: 127 MAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDM 186

Query: 361 YAKCGAIEDALAVFRGTLAKQTDVLI*NAMIGGLATHG 474
           YAKCGA+E+A AVFRG   +++DVLI NAMIGGLATHG
Sbjct: 187 YAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHG 224



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
 Frame = +1

Query: 25  NLVSWNSMLDCYVKCREVLLAREVFDLMPER--DVVSWSSMIDGYVKGSEYSEALAIFQK 198
           NLV   S++D Y KC  V  A  VF  +  R  DV+ W++MI G        E+L ++ +
Sbjct: 176 NLVLRTSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTE 235

Query: 199 MNGSGVNANEVTMVSVLGACAHLGALEQGIMMHRYIVDKKIALTLVLRTSLVDMYAKCGA 378
           M  +G+  +E+T + +L ACAH G ++Q   +   +    +         +VD+ A+ G 
Sbjct: 236 MQIAGIKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVMARAGQ 295

Query: 379 IEDALAVFRGTLAKQTDVLI*NAMIGGLATHG 474
           + +A   F   +  +    +  A++ G   HG
Sbjct: 296 VAEAYQ-FLCQMPLEPTASMLGALLSGCMNHG 326