BLASTX nr result

ID: Atractylodes22_contig00037195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037195
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   142   4e-32
ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial...   139   3e-31
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   139   3e-31
ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|3...   139   3e-31

>ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|222856496|gb|EEE94043.1|
           predicted protein [Populus trichocarpa]
          Length = 910

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/88 (76%), Positives = 76/88 (86%)
 Frame = +2

Query: 236 KSSQERQQRLALLFEDLYQSGFISYPRTETDSFSARTNLRILVQEQQEHPVWGSYAQRLL 415
           + S E+  ++A   EDLYQ+GFISYPRTETDSFS+RT+L  +VQE QEHPVWGSYAQRLL
Sbjct: 314 RMSSEQTMKVA---EDLYQAGFISYPRTETDSFSSRTDLHTIVQEHQEHPVWGSYAQRLL 370

Query: 416 DPSSGLWRNPSGGGHDDKAHPPIHPTKF 499
           DP +GLWRNPS GGHDDKAHPPIHPTKF
Sbjct: 371 DPGAGLWRNPSNGGHDDKAHPPIHPTKF 398


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223533243|gb|EEF34998.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  142 bits (357), Expect = 4e-32
 Identities = 64/86 (74%), Positives = 74/86 (86%)
 Frame = +2

Query: 242 SQERQQRLALLFEDLYQSGFISYPRTETDSFSARTNLRILVQEQQEHPVWGSYAQRLLDP 421
           S E+  ++A   EDLYQSGFISYPRTETD FS+RT+L  +V++QQ HP+WGSYAQRLLDP
Sbjct: 318 SSEQTMKVA---EDLYQSGFISYPRTETDGFSSRTDLHTIVRDQQAHPIWGSYAQRLLDP 374

Query: 422 SSGLWRNPSGGGHDDKAHPPIHPTKF 499
            +GLWRNPS GGHDDKAHPPIHPTKF
Sbjct: 375 GTGLWRNPSTGGHDDKAHPPIHPTKF 400


>ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial [Cucumis sativus]
          Length = 607

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/88 (72%), Positives = 73/88 (82%)
 Frame = +2

Query: 236 KSSQERQQRLALLFEDLYQSGFISYPRTETDSFSARTNLRILVQEQQEHPVWGSYAQRLL 415
           + S E   ++A   EDLYQ+GFISYPRTETD FS RT+L  +V+EQQEH +WG+YAQRLL
Sbjct: 319 RMSSEHTMKVA---EDLYQAGFISYPRTETDCFSQRTDLHGIVREQQEHQIWGAYAQRLL 375

Query: 416 DPSSGLWRNPSGGGHDDKAHPPIHPTKF 499
           DP S LWRNPSGGGHDDKAHPPIHPTKF
Sbjct: 376 DPESRLWRNPSGGGHDDKAHPPIHPTKF 403


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/88 (72%), Positives = 73/88 (82%)
 Frame = +2

Query: 236 KSSQERQQRLALLFEDLYQSGFISYPRTETDSFSARTNLRILVQEQQEHPVWGSYAQRLL 415
           + S E   ++A   EDLYQ+GFISYPRTETD FS RT+L  +V+EQQEH +WG+YAQRLL
Sbjct: 319 RMSSEHTMKVA---EDLYQAGFISYPRTETDCFSQRTDLHGIVREQQEHQIWGAYAQRLL 375

Query: 416 DPSSGLWRNPSGGGHDDKAHPPIHPTKF 499
           DP S LWRNPSGGGHDDKAHPPIHPTKF
Sbjct: 376 DPESRLWRNPSGGGHDDKAHPPIHPTKF 403


>ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|355491701|gb|AES72904.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 587

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/88 (71%), Positives = 73/88 (82%)
 Frame = +2

Query: 236 KSSQERQQRLALLFEDLYQSGFISYPRTETDSFSARTNLRILVQEQQEHPVWGSYAQRLL 415
           + S ER  ++A   E+LYQ GFISYPRTETD+FS+RT+L  +VQEQQ HP WG YAQRLL
Sbjct: 318 RMSSERTMKVA---EELYQGGFISYPRTETDNFSSRTDLHAIVQEQQGHPEWGIYAQRLL 374

Query: 416 DPSSGLWRNPSGGGHDDKAHPPIHPTKF 499
           DP +GLWRNP GGGHDD+AHPPIHPTKF
Sbjct: 375 DPGAGLWRNPRGGGHDDQAHPPIHPTKF 402


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