BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037182
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   170   1e-40
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   155   3e-36
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   155   4e-36
ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D sub...   147   9e-34

>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  170 bits (430), Expect = 1e-40
 Identities = 87/152 (57%), Positives = 110/152 (72%), Gaps = 16/152 (10%)
 Frame = +2

Query: 8   SYKEKSSNGA--LLFDLNEVF-------------DDDDMMDAPSVRDLDKLSLKNFSKRA 142
           S KEK SNG+  + FD++++F             D+DD  D   +++L +  LKNF K+A
Sbjct: 8   SGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGESFLKNFCKKA 67

Query: 143 STSFFKHYGLISHQINSYNDSIKVGIQDVFDSMGEIIIEPGYDPSKKGDNEWRYAALKFG 322
           ST FF+ YG ISHQINSYND I  GIQ VFDS+GEI +EPGYDPSK+GD +W++A++KFG
Sbjct: 68  STGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDWKHASVKFG 127

Query: 323 KVTLERPRFWTGEKFSDNGGKN-LEFLPRHAR 415
           KVTLERP+FW GEKFS  GGK  L+ LPRHAR
Sbjct: 128 KVTLERPKFWAGEKFSVGGGKEYLDLLPRHAR 159


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  155 bits (392), Expect = 3e-36
 Identities = 81/150 (54%), Positives = 108/150 (72%), Gaps = 14/150 (9%)
 Frame = +2

Query: 8   SYKEKSSNGALL--FDLNEVF-----------DDDDMMDAPSVRDLDKLSLKNFSKRAST 148
           S KEK+SNG+ +  FD++ +F           D+DD +D    ++L    L+NF K+AS 
Sbjct: 20  SGKEKTSNGSTMMDFDVDGLFEVDDYDWDEDEDEDDNLDM--AKELGGGFLRNFCKKASA 77

Query: 149 SFFKHYGLISHQINSYNDSIKVGIQDVFDSMGEIIIEPGYDPSKKGDNEWRYAALKFGKV 328
            FF+ YG+ISHQI+SYND I+ GIQ VFDS+GEI +EPGYDPSKKG+ +W++A++KFGKV
Sbjct: 78  GFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGDWKHASVKFGKV 137

Query: 329 TLERPRFWTGEKFSD-NGGKNLEFLPRHAR 415
           TL+RP+FW GEKFS  NG + L   PRHAR
Sbjct: 138 TLDRPKFWAGEKFSAYNGEEYLNLWPRHAR 167


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  155 bits (391), Expect = 4e-36
 Identities = 79/136 (58%), Positives = 98/136 (72%)
 Frame = +2

Query: 8   SYKEKSSNGALLFDLNEVFDDDDMMDAPSVRDLDKLSLKNFSKRASTSFFKHYGLISHQI 187
           S  EK SNG  +    E+  DDD+M +  + DL+K  LK F K+ + SFF  YGLI HQI
Sbjct: 51  SMGEKLSNGVQM----EI--DDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQI 104

Query: 188 NSYNDSIKVGIQDVFDSMGEIIIEPGYDPSKKGDNEWRYAALKFGKVTLERPRFWTGEKF 367
           NS+ND IK GIQ VFDS GEI +EPGYDPSK+G+ +WRYA+++FGKVTLERPR W GE  
Sbjct: 105 NSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGE-- 162

Query: 368 SDNGGKNLEFLPRHAR 415
             +G ++L FLPRHAR
Sbjct: 163 -SDGKESLNFLPRHAR 177


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
           vinifera]
          Length = 1198

 Score =  155 bits (391), Expect = 4e-36
 Identities = 79/136 (58%), Positives = 98/136 (72%)
 Frame = +2

Query: 8   SYKEKSSNGALLFDLNEVFDDDDMMDAPSVRDLDKLSLKNFSKRASTSFFKHYGLISHQI 187
           S  EK SNG  +    E+  DDD+M +  + DL+K  LK F K+ + SFF  YGLI HQI
Sbjct: 15  SMGEKLSNGVQM----EI--DDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQI 68

Query: 188 NSYNDSIKVGIQDVFDSMGEIIIEPGYDPSKKGDNEWRYAALKFGKVTLERPRFWTGEKF 367
           NS+ND IK GIQ VFDS GEI +EPGYDPSK+G+ +WRYA+++FGKVTLERPR W GE  
Sbjct: 69  NSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGE-- 126

Query: 368 SDNGGKNLEFLPRHAR 415
             +G ++L FLPRHAR
Sbjct: 127 -SDGKESLNFLPRHAR 141


>ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
           sativus]
          Length = 1031

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/118 (59%), Positives = 85/118 (72%), Gaps = 1/118 (0%)
 Frame = +2

Query: 65  DDDDMMDAP-SVRDLDKLSLKNFSKRASTSFFKHYGLISHQINSYNDSIKVGIQDVFDSM 241
           DDDD    P ++ DL +  LK+F K++S +FF  YGLISHQINSYND IK GIQ  FD  
Sbjct: 29  DDDDYYSEPVNIHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFF 88

Query: 242 GEIIIEPGYDPSKKGDNEWRYAALKFGKVTLERPRFWTGEKFSDNGGKNLEFLPRHAR 415
           G+I+++PGYDPSKKGD EWRYA +KFGKVTL++P+FW G       GK    LPRHAR
Sbjct: 89  GDILVQPGYDPSKKGDGEWRYATVKFGKVTLDKPKFWGGAA----SGKEYNMLPRHAR 142