BLASTX nr result

ID: Atractylodes22_contig00037122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037122
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...    92   9e-27
gb|ABM55238.1| integrase [Beta vulgaris]                               89   3e-25
gb|ABH08430.1| putative integrase [Beta vulgaris]                      89   3e-25
emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]          93   1e-24
gb|AAG59661.1|AC084319_19 putative copia-type pol polyprotein [O...    96   3e-24

>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score = 91.7 bits (226), Expect(2) = 9e-27
 Identities = 43/91 (47%), Positives = 56/91 (61%)
 Frame = +1

Query: 94   TLFIKREKKDIILIQVYVDDIIFGSTNPQYCHNXXXXXXXXXXXXXXGQMNFFLGLQVKQ 273
            TLFIK +  D++++Q+YVDDIIFGSTN   C                G+++FFLGLQ+KQ
Sbjct: 1818 TLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQ 1877

Query: 274  LSTGIFISQSKYIWDILRKFHMENSSTMPTP 366
            L  GIFISQ KY  D+L+KF +       TP
Sbjct: 1878 LKDGIFISQEKYTRDLLKKFKLNEGKVAKTP 1908



 Score = 53.5 bits (127), Expect(2) = 9e-27
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +3

Query: 3    LYGLKQAQRAWYDTLSKFLLKSGFSRGKIDNPI 101
            LYGLKQA RAWYD LSKFLL++ F  GKIDN +
Sbjct: 1787 LYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTL 1819


>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score = 89.4 bits (220), Expect(2) = 3e-25
 Identities = 42/91 (46%), Positives = 57/91 (62%)
 Frame = +1

Query: 94   TLFIKREKKDIILIQVYVDDIIFGSTNPQYCHNXXXXXXXXXXXXXXGQMNFFLGLQVKQ 273
            TLF+K +  DI+L+Q+YVDDIIFG+TN   C                G++NFFLGLQ+KQ
Sbjct: 1187 TLFLKSKGTDILLVQIYVDDIIFGATNETLCKEFSRLVSNEFEMSMMGELNFFLGLQIKQ 1246

Query: 274  LSTGIFISQSKYIWDILRKFHMENSSTMPTP 366
               GI + Q KYI ++L+K+ +ENS    TP
Sbjct: 1247 TEKGIIVHQQKYIKELLKKYGLENSKINHTP 1277



 Score = 50.8 bits (120), Expect(2) = 3e-25
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = +3

Query: 3    LYGLKQAQRAWYDTLSKFLLKSGFSRGKIDNPI 101
            LYGLKQA R+WY+ LSKFLL++ F RGK+D  +
Sbjct: 1156 LYGLKQAPRSWYERLSKFLLENNFKRGKVDKTL 1188


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score = 89.4 bits (220), Expect(2) = 3e-25
 Identities = 42/91 (46%), Positives = 57/91 (62%)
 Frame = +1

Query: 94   TLFIKREKKDIILIQVYVDDIIFGSTNPQYCHNXXXXXXXXXXXXXXGQMNFFLGLQVKQ 273
            TLF+K +  DI+L+Q+YVDDIIFG+TN   C                G++NFFLGLQ+KQ
Sbjct: 1187 TLFLKSKGTDILLVQIYVDDIIFGATNETLCKEFSRLVSNEFEMSMMGELNFFLGLQIKQ 1246

Query: 274  LSTGIFISQSKYIWDILRKFHMENSSTMPTP 366
               GI + Q KYI ++L+K+ +ENS    TP
Sbjct: 1247 TEKGIIVHQQKYIKELLKKYGLENSKINHTP 1277



 Score = 50.8 bits (120), Expect(2) = 3e-25
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = +3

Query: 3    LYGLKQAQRAWYDTLSKFLLKSGFSRGKIDNPI 101
            LYGLKQA R+WY+ LSKFLL++ F RGK+D  +
Sbjct: 1156 LYGLKQAPRSWYERLSKFLLENNFKRGKVDKTL 1188


>emb|CAE04887.3| OSJNBa0042I15.9 [Oryza sativa Japonica Group]
          Length = 1510

 Score = 93.2 bits (230), Expect(2) = 1e-24
 Identities = 45/92 (48%), Positives = 58/92 (63%)
 Frame = +1

Query: 91   TTLFIKREKKDIILIQVYVDDIIFGSTNPQYCHNXXXXXXXXXXXXXXGQMNFFLGLQVK 270
            TTLF K+ K D+ + Q+YVDDIIFGSTN  +C                G++ FFL LQVK
Sbjct: 1172 TTLFTKKFKSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEMSMMGELTFFLWLQVK 1231

Query: 271  QLSTGIFISQSKYIWDILRKFHMENSSTMPTP 366
            Q   G FISQ+KY+ DIL+KF ME++  + TP
Sbjct: 1232 QAQEGTFISQTKYVKDILKKFGMEDAKPIKTP 1263



 Score = 45.1 bits (105), Expect(2) = 1e-24
 Identities = 20/33 (60%), Positives = 23/33 (69%)
 Frame = +3

Query: 3    LYGLKQAQRAWYDTLSKFLLKSGFSRGKIDNPI 101
            LYGLKQA RAWY+ L  FLLK+GF  G  D  +
Sbjct: 1142 LYGLKQAPRAWYECLRDFLLKNGFEIGNADTTL 1174


>gb|AAG59661.1|AC084319_19 putative copia-type pol polyprotein [Oryza sativa Japonica Group]
          Length = 1778

 Score = 95.5 bits (236), Expect(2) = 3e-24
 Identities = 45/92 (48%), Positives = 59/92 (64%)
 Frame = +1

Query: 91   TTLFIKREKKDIILIQVYVDDIIFGSTNPQYCHNXXXXXXXXXXXXXXGQMNFFLGLQVK 270
            TTLF K+ + D+ + Q+YVDDIIFGSTN  +C                G++ FFLGLQVK
Sbjct: 1336 TTLFTKKFENDLFICQIYVDDIIFGSTNASFCEEFSSIMAKRFEMSIMGELTFFLGLQVK 1395

Query: 271  QLSTGIFISQSKYIWDILRKFHMENSSTMPTP 366
            Q   G FISQ+KY+ DIL+KF ME++  + TP
Sbjct: 1396 QAQEGTFISQTKYVKDILKKFEMEDAKPIKTP 1427



 Score = 41.2 bits (95), Expect(2) = 3e-24
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +3

Query: 3    LYGLKQAQRAWYDTLSKFLLKSGFSRG 83
            LYGLKQA R WY+ L  FLLK+GF  G
Sbjct: 1306 LYGLKQAPRVWYECLRDFLLKNGFEIG 1332


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