BLASTX nr result

ID: Atractylodes22_contig00037044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037044
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316920.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002329111.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002532684.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
dbj|BAF02554.1| hypothetical protein [Nicotiana benthamiana]           55   5e-06
ref|XP_002882949.1| hypothetical protein ARALYDRAFT_478998 [Arab...    55   6e-06

>ref|XP_002316920.1| predicted protein [Populus trichocarpa] gi|222859985|gb|EEE97532.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -2

Query: 151 RRRRASKEIVRRALTPPARRLSRRWFDFRPSPSRLSVMSMA 29
           RR +A+KE++RRAL PP RRL+ RWF+FRP+PSRLS MSMA
Sbjct: 69  RRHQANKELLRRALAPPNRRLTLRWFNFRPTPSRLSNMSMA 109


>ref|XP_002329111.1| predicted protein [Populus trichocarpa] gi|222869780|gb|EEF06911.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -2

Query: 151 RRRRASKEIVRRALTPPARRLSRRWFDFRPSPSRLSVMSMA 29
           RR +A+ EI+RRAL PP RRL+ RWF+F+P+PSRLS MSMA
Sbjct: 68  RRNQANTEILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108


>ref|XP_002532684.1| conserved hypothetical protein [Ricinus communis]
           gi|223527581|gb|EEF29697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = -2

Query: 151 RRRRASKEIVRRALTPPARRLSRRWFDFRPSPSRLSVMSMA 29
           R  +AS+EI+RRAL PP R++S RW++FRP+PSRLS MSMA
Sbjct: 77  RHHQASREILRRALAPPNRKMSLRWWNFRPTPSRLSNMSMA 117


>dbj|BAF02554.1| hypothetical protein [Nicotiana benthamiana]
          Length = 109

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = -2

Query: 139 ASKEIVRRALTPPARRLSRRWFDFRPSPSRLSVMSMA 29
           A+KEI++RALTPPA RL+ RW DF+P+PSRL  MS A
Sbjct: 73  ANKEIIKRALTPPAPRLTLRWLDFKPTPSRLCNMSAA 109


>ref|XP_002882949.1| hypothetical protein ARALYDRAFT_478998 [Arabidopsis lyrata subsp.
           lyrata] gi|297328789|gb|EFH59208.1| hypothetical protein
           ARALYDRAFT_478998 [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -2

Query: 166 EMVMPRRRRASKEIVRRALTPPARRLSRRWFDFRPSPSRLSVMS 35
           E +M +    S+E++RRALTPP RR++ RW +FRP+PSRL  MS
Sbjct: 61  ERLMQKASDGSREVLRRALTPPIRRMNLRWLNFRPTPSRLCKMS 104


Top