BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037024
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519032.1| double-stranded RNA binding protein, putativ...    40   4e-07
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...    39   5e-06
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...    39   8e-06

>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223541695|gb|EEF43243.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 978

 Score = 39.7 bits (91), Expect(2) = 4e-07
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = -3

Query: 316 YSTSEQSSTPAAMPIVPPTIPKPMVQYPTKQLPFATGNPVLQPLTQVNITETSLYYYYLA 137
           Y+ +  SS P       PT    +V +P+ QLP A   P+++PL QV  +E SL     A
Sbjct: 502 YTMASSSSIPV------PTSQPAVVTFPSMQLPQAA--PLVKPLGQVVPSEPSLQSSP-A 552

Query: 136 REEGEVPE 113
           REEGEVPE
Sbjct: 553 REEGEVPE 560



 Score = 39.3 bits (90), Expect(2) = 4e-07
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -1

Query: 114 KVPESELDRYTRRRFLILQHGMDI 43
           +VPESELD  TRRR LILQHG D+
Sbjct: 557 EVPESELDPDTRRRLLILQHGQDL 580


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 958

 Score = 38.5 bits (88), Expect(2) = 5e-06
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -1

Query: 114 KVPESELDRYTRRRFLILQHGMD 46
           +VPESELD  TRRR LILQHG D
Sbjct: 538 EVPESELDLDTRRRLLILQHGQD 560



 Score = 36.6 bits (83), Expect(2) = 5e-06
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = -3

Query: 370 AMVSSTTPPMMPRQIQD---LYSTSEQSSTPAAMPIVPPTIPKPMVQYPTKQLPFATGNP 200
           A+ +S+T P M   +       S+ + +   ++  + PPT    +VQ+   Q P    N 
Sbjct: 456 AISASSTVPAMTTNLDPRLAFNSSLQYTMVSSSGTVPPPTAQASIVQFGNVQFP--QPNT 513

Query: 199 VLQPLTQVNITETSLYYYYLAREEGEVPE 113
           +++P+ QV     SL+    AREEGEVPE
Sbjct: 514 LVKPICQVTPPGPSLHSSP-AREEGEVPE 541


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 954

 Score = 38.5 bits (88), Expect(2) = 8e-06
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -1

Query: 114 KVPESELDRYTRRRFLILQHGMD 46
           +VPESELD  TRRR LILQHG D
Sbjct: 533 EVPESELDPDTRRRLLILQHGQD 555



 Score = 35.8 bits (81), Expect(2) = 8e-06
 Identities = 25/86 (29%), Positives = 45/86 (52%)
 Frame = -3

Query: 370 AMVSSTTPPMMPRQIQDLYSTSEQSSTPAAMPIVPPTIPKPMVQYPTKQLPFATGNPVLQ 191
           A+ +++T P+    +    ++ + +  P+   + PPT    M+ +P  Q P      +++
Sbjct: 455 ALSAASTIPVTTANLDPRLTSLQYTMVPSGS-VPPPTAQASMMPFPHVQFPQPA--TLVK 511

Query: 190 PLTQVNITETSLYYYYLAREEGEVPE 113
           P+ Q   +E SL+    AREEGEVPE
Sbjct: 512 PMGQAAPSEPSLHSSP-AREEGEVPE 536