BLASTX nr result

ID: Atractylodes22_contig00037017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037017
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60886.1| hypothetical protein VITISV_008816 [Vitis vinifera]    70   1e-10
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    69   3e-10
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    67   2e-09
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    62   5e-08
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    60   2e-07

>emb|CAN60886.1| hypothetical protein VITISV_008816 [Vitis vinifera]
          Length = 616

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
 Frame = -2

Query: 442 KDDRPNVMSFAVQTNVSRGRGESRLESKESIRFCTHCKRDGHEVDKCFQLVGYPEWWVDX 263
           K++R N MSFA++T    G   SR E K+    CT+CKR+GH+ + CFQL+ YP+WW   
Sbjct: 15  KEERGNPMSFAMKT----GGRNSREEEKDRNVVCTNCKREGHDANTCFQLIRYPKWW--- 67

Query: 262 XXXXXXXXXXXXXSQRPPSSSLGRGNNLP-----------CAYATTSTTHPGQKSDLNDI 116
                          RP  +  GRG                A A  +TT        ND 
Sbjct: 68  -------------GNRPRKNVSGRGGGRKHGAHGGHDKGGIAQANAATT--------NDA 106

Query: 115 NKPGLLEVTEDQW 77
           NK G++ + ++QW
Sbjct: 107 NKKGIVGLNDEQW 119


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
 Frame = -2

Query: 442 KDDRPNVMSFAVQTNVSRGRGESRLESKESIRFCTHCKRDGHEVDKCFQLVGYPEWWVD- 266
           K++R + MSFAVQ       G+     K+    C++CKR GHEVD CFQ + YPEWW D 
Sbjct: 189 KEERGSPMSFAVQVGGRNPGGDG----KDKTVICSNCKRKGHEVDSCFQRIAYPEWWGDR 244

Query: 265 -XXXXXXXXXXXXXXSQRPPSSSLGRGNNLPCAYATTSTTHPGQKSDLNDINKPGLLEVT 89
                           Q+      GRG         T  T  G +S + D N+ G+  ++
Sbjct: 245 PRTTTSGCSGGHGRGVQQGTGGGRGRGGTARANVVQTLGT-DGGRSVVTDSNRTGISGLS 303

Query: 88  EDQW 77
           + QW
Sbjct: 304 DKQW 307


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -2

Query: 442 KDDRPNVMSFAVQTNVSRGRGESRLESKESIRFCTHCKRDGHEVDKCFQLVGYPEWW 272
           K++R N+MSFA++      RGE     K+    CT+CKR+GH+VD CFQL+GY EWW
Sbjct: 201 KEERGNLMSFAMKVGGQNSRGEX----KDRNVVCTNCKREGHDVDTCFQLIGYLEWW 253


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
 Frame = -2

Query: 439 DDRPNVMSFAVQTN--VSRGRGESRLESKESIRFCTHCKRDGHEVDKCFQLVGYPEWWVD 266
           DD+  V +FA Q    + +GRG+     K+    C HC R GH  + C+ ++GYPEWW D
Sbjct: 147 DDQREVNAFAAQMRPKLYQGRGDE----KDKSMVCKHCNRSGHASESCYAVIGYPEWWGD 202

Query: 265 XXXXXXXXXXXXXXSQRPPSSSLGRGNNLPCAYATTST-----THPGQKSDLNDINKPGL 101
                          +   +SS GRG     AYA   T     T+      L D ++ G+
Sbjct: 203 ----RPRSRSLQTRGRGGTNSSGGRGRG-AAAYANRVTVPNHDTYEQANYALTDEDRDGV 257

Query: 100 LEVTEDQWR 74
             +T+ QWR
Sbjct: 258 NGLTDSQWR 266


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
 Frame = -2

Query: 439 DDRPNVMSFAVQTNVSRGRGE------SRLESKESIRFCTHCKRDGHEVDKCFQLVGYPE 278
           ++R +V +FAVQ    R R E      +  E  ++ + CTHC R GH  + CF L+GYPE
Sbjct: 239 EERTDVTAFAVQM---RPRSEVISEKFANSEKLQNKKLCTHCNRGGHSPENCFVLIGYPE 295

Query: 277 WWVDXXXXXXXXXXXXXXSQRPPSSSLGRGNNLP--------CAYATTSTTHPGQKSD-- 128
           WW D                   S+S GRG   P          Y     T P   S+  
Sbjct: 296 WWGDRPRGKSNSNG---------STSRGRGRFGPGFNGGQPRPTYVNVVMTGPFPSSEHV 346

Query: 127 ---LNDINKPGLLEVTEDQWR 74
              + D ++  +  +T++QWR
Sbjct: 347 NRVITDSDRDAVSGLTDEQWR 367


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