BLASTX nr result

ID: Atractylodes22_contig00037012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037012
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...    58   1e-06
ref|XP_004157306.1| PREDICTED: probable RNA-dependent RNA polyme...    56   4e-06
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...    56   4e-06

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = -1

Query: 484 VEVPLPFSVDRLIEEICVQRLLPMPDVAARQALSKTGEESAIDVLKRINSTSTRIQNLSG 305
           +EV LP SV+++++ IC ++  P P+   R+ L+  GEES +++L++I  +  +I+NLS 
Sbjct: 1   MEVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKI--SHLKIRNLSA 58

Query: 304 FIVYMVNK--YGSVASNS 257
            I YMV K   G  AS+S
Sbjct: 59  LINYMVGKAAQGDAASHS 76


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = -1

Query: 484 VEVPLPFSVDRLIEEICVQRLLPMPDVAARQALSKTGEESAIDVLKRINSTSTRIQNLSG 305
           +EV LP SV+++++ IC ++  P P+   R+ L+  GEES +++L++I  +  +I+NLS 
Sbjct: 1   MEVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKI--SHLKIRNLSA 58

Query: 304 FIVYMVNK--YGSVASNS 257
            I YMV K   G  AS+S
Sbjct: 59  LINYMVGKAAQGDAASHS 76


>ref|XP_004157306.1| PREDICTED: probable RNA-dependent RNA polymerase 4-like [Cucumis
           sativus]
          Length = 560

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/73 (41%), Positives = 46/73 (63%)
 Frame = -1

Query: 499 MMDGVVEVPLPFSVDRLIEEICVQRLLPMPDVAARQALSKTGEESAIDVLKRINSTSTRI 320
           M D  +EV LP SV++ +  IC     P+PD    +AL+  GE +A+D L +I+ ++ R 
Sbjct: 51  MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLRALASVGEVAALDALHKISCSTVR- 109

Query: 319 QNLSGFIVYMVNK 281
            NLSGFI+++V K
Sbjct: 110 -NLSGFILHLVRK 121


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
           sativus]
          Length = 1056

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/73 (41%), Positives = 46/73 (63%)
 Frame = -1

Query: 499 MMDGVVEVPLPFSVDRLIEEICVQRLLPMPDVAARQALSKTGEESAIDVLKRINSTSTRI 320
           M D  +EV LP SV++ +  IC     P+PD    +AL+  GE +A+D L +I+ ++ R 
Sbjct: 51  MADHFLEVSLPPSVEQFLLHICKLHDQPLPDTEVLRALASVGEVAALDALHKISCSTVR- 109

Query: 319 QNLSGFIVYMVNK 281
            NLSGFI+++V K
Sbjct: 110 -NLSGFILHLVRK 121


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