BLASTX nr result

ID: Atractylodes22_contig00036992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036992
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   102   3e-20
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14

>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = -2

Query: 189 MYRALGRHRLIYRSLISNYVKTGLIDKALQVFDEMTQSDCRVFSIDYNRIIGVLVCHSRF 10
           MY++LG HRLIYRS I+ YVK GLIDKA+QVFDEM+QS+CRVFSIDYNR IGVL+ HSRF
Sbjct: 1   MYQSLGAHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRF 60

Query: 9   EL 4
           +L
Sbjct: 61  DL 62


>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/62 (75%), Positives = 55/62 (88%)
 Frame = -2

Query: 189 MYRALGRHRLIYRSLISNYVKTGLIDKALQVFDEMTQSDCRVFSIDYNRIIGVLVCHSRF 10
           MYR+LGRHRL YR+ IS+YVK GLID+AL+ FDEMT+S+CRVFSIDYNR IGVLV  SRF
Sbjct: 1   MYRSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRF 60

Query: 9   EL 4
           +L
Sbjct: 61  DL 62


>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = -2

Query: 189 MYRALGRHRLIYRSLISNYVKTGLIDKALQVFDEMTQSDCRVFSIDYNRIIGVLVCHSRF 10
           MY+ LG HRLIYR+ I++YVK GLID A++VFDEMT S+CRVF IDYNR IGVL+ HSRF
Sbjct: 1   MYQPLGVHRLIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRF 60

Query: 9   EL 4
           +L
Sbjct: 61  DL 62


>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
           gi|449494962|ref|XP_004159696.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = -2

Query: 189 MYRALGRHRLIYRSLISNYVKTGLIDKALQVFDEMTQSDCRVFSIDYNRIIGVLVCHSRF 10
           MY  LG +RL++R+ I+  VK GLID+A+++FDEMTQSDC V S DYNR IGVL+  SRF
Sbjct: 1   MYHRLGANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRF 60

Query: 9   EL 4
           +L
Sbjct: 61  DL 62


>ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/63 (61%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
 Frame = -2

Query: 189 MYRA-LGRHRLIYRSLISNYVKTGLIDKALQVFDEMTQSDCRVFSIDYNRIIGVLVCHSR 13
           MY++ +G HRL YRS IS  VK GLI++A+ +FD+MT+S+CRVFS+DYNR IGVL+ HSR
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 12  FEL 4
             L
Sbjct: 61  LHL 63


Top