BLASTX nr result

ID: Atractylodes22_contig00036924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036924
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   407   e-111
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   400   e-109
gb|AFK42005.1| unknown [Medicago truncatula]                          397   e-109
gb|AAS80153.1| ACT11D09.9 [Cucumis melo]                              395   e-108

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  407 bits (1046), Expect = e-111
 Identities = 197/222 (88%), Positives = 209/222 (94%)
 Frame = -3

Query: 666 EQFTYENILDCMKKVTAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGD 487
           EQFT ++I  C+ KV AVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYA VGD+AMVYTGD
Sbjct: 118 EQFTADHIKQCLNKVIAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGD 177

Query: 486 YNMTPDRPLGAAQIDRLQLDVLITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIP 307
           YNMTPDR LGAAQIDRLQLD+LITESTYATTIRDSKYAREREFLK VHKCVA GGKVLIP
Sbjct: 178 YNMTPDRHLGAAQIDRLQLDLLITESTYATTIRDSKYAREREFLKVVHKCVAGGGKVLIP 237

Query: 306 TFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKVLINWTSQKVKNTYATRN 127
           TFALGRAQELC+LLDDYWERMNLKVPIYFSAGLTIQAN+YYK+LI WTSQK+K TY +RN
Sbjct: 238 TFALGRAQELCLLLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIGWTSQKIKETYTSRN 297

Query: 126 AFDFKNVHSFDRSLLDAPGPCVLFATPGMISGGFSLEVFKHW 1
           AFDFKNV++FDRSLLDAPGPCVLFATPGMISGGFSLEVFK W
Sbjct: 298 AFDFKNVYTFDRSLLDAPGPCVLFATPGMISGGFSLEVFKRW 339


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  407 bits (1046), Expect = e-111
 Identities = 199/222 (89%), Positives = 211/222 (95%)
 Frame = -3

Query: 666 EQFTYENILDCMKKVTAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGD 487
           EQFT  +I  CM+KV AVDLKQTVQVD DLQIRAYYAGHVLGAAMFYA VGD+AMVYTGD
Sbjct: 118 EQFTSLHISQCMEKVIAVDLKQTVQVDDDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGD 177

Query: 486 YNMTPDRPLGAAQIDRLQLDVLITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIP 307
           YNMTPDR LGAAQIDRL+LD+LITESTYATTIRDSKYAREREFLKAVH+CVA GGKVLIP
Sbjct: 178 YNMTPDRHLGAAQIDRLELDLLITESTYATTIRDSKYAREREFLKAVHECVAGGGKVLIP 237

Query: 306 TFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKVLINWTSQKVKNTYATRN 127
           TFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYK+LI+WTSQKVK TYATRN
Sbjct: 238 TFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKILISWTSQKVKETYATRN 297

Query: 126 AFDFKNVHSFDRSLLDAPGPCVLFATPGMISGGFSLEVFKHW 1
           AFDFK+VH+FDRSL++APGPCVLFATPGMISGGFSLEVFK W
Sbjct: 298 AFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLEVFKQW 339


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Cucumis sativus]
          Length = 649

 Score =  400 bits (1027), Expect = e-109
 Identities = 190/222 (85%), Positives = 208/222 (93%)
 Frame = -3

Query: 666 EQFTYENILDCMKKVTAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGD 487
           EQFT ++I++C+KKV  VDLKQT+QVD+DLQIRAYYAGHVLGAAMFYA VGDAAMVYTGD
Sbjct: 118 EQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGD 177

Query: 486 YNMTPDRPLGAAQIDRLQLDVLITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIP 307
           YNMTPDR LGAAQIDR+QLD+LITESTYATTIRDSKYAREREFLKAVH C+A+GGKVLIP
Sbjct: 178 YNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLASGGKVLIP 237

Query: 306 TFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKVLINWTSQKVKNTYATRN 127
           TFALGRAQELC+LLDDYWERMNLK PIY SAGLT+QAN+YYK+LI+WTSQKVK TY TRN
Sbjct: 238 TFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYTTRN 297

Query: 126 AFDFKNVHSFDRSLLDAPGPCVLFATPGMISGGFSLEVFKHW 1
           AFDFKNV  FDRS++DAPGPCVLFATPGMIS GFSLEVFK W
Sbjct: 298 AFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRW 339


>gb|AFK42005.1| unknown [Medicago truncatula]
          Length = 534

 Score =  397 bits (1021), Expect = e-109
 Identities = 191/222 (86%), Positives = 208/222 (93%)
 Frame = -3

Query: 666 EQFTYENILDCMKKVTAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGD 487
           EQFT ++I +CMKKV AVDLKQTVQVD+DLQIRAYYAGHV+GAAMFY  VGDA MVYTGD
Sbjct: 118 EQFTSDHIAECMKKVIAVDLKQTVQVDEDLQIRAYYAGHVIGAAMFYVKVGDAEMVYTGD 177

Query: 486 YNMTPDRPLGAAQIDRLQLDVLITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIP 307
           YNMTPDR LGAAQIDRL+LD+LITESTYATTIRDSKYAREREFLKAVHKCV+ GGKVLIP
Sbjct: 178 YNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIP 237

Query: 306 TFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKVLINWTSQKVKNTYATRN 127
           TFALGRAQEL ILLDDYWERMNLKVPIYFS+GLTIQAN Y+K+LI WTSQK+K+TY+T N
Sbjct: 238 TFALGRAQELRILLDDYWERMNLKVPIYFSSGLTIQANTYHKMLIGWTSQKIKDTYSTHN 297

Query: 126 AFDFKNVHSFDRSLLDAPGPCVLFATPGMISGGFSLEVFKHW 1
           AFDFKNVH F+RS+LDAPGPCVLFATPGM+ GGFSLEVFKHW
Sbjct: 298 AFDFKNVHKFERSMLDAPGPCVLFATPGMLIGGFSLEVFKHW 339


>gb|AAS80153.1| ACT11D09.9 [Cucumis melo]
          Length = 708

 Score =  395 bits (1015), Expect = e-108
 Identities = 190/223 (85%), Positives = 208/223 (93%), Gaps = 1/223 (0%)
 Frame = -3

Query: 666 EQFTYENILDCMKKVTAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGD 487
           EQFT ++I++C+KKV  VDLKQT+QVD+DLQIRAYYAGHVLGAAMFYA VGDAAMVYTGD
Sbjct: 150 EQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGD 209

Query: 486 YNMTPDRPLGAAQIDRLQLDVLITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIP 307
           YNMTPDR LGAAQIDR+QLD+LITESTYATTIRDSKYAREREFLKAVH C+A+GGKVLIP
Sbjct: 210 YNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLASGGKVLIP 269

Query: 306 TFALGRA-QELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKVLINWTSQKVKNTYATR 130
           TFALGRA QELC+LLDDYWERMNLK PIY SAGLT+QAN+YYK+LI+WTSQKVK TY TR
Sbjct: 270 TFALGRAQQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYTTR 329

Query: 129 NAFDFKNVHSFDRSLLDAPGPCVLFATPGMISGGFSLEVFKHW 1
           NAFDFKNV  FDRS++DAPGPCVLFATPGMIS GFSLEVFK W
Sbjct: 330 NAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRW 372


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