BLASTX nr result

ID: Atractylodes22_contig00036888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036888
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]          113   1e-23
emb|CAE04852.2| OSJNBa0084K01.24 [Oryza sativa Japonica Group]        113   1e-23
gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]     113   2e-23
gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]     112   3e-23
gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subc...   112   3e-23

>emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]
          Length = 711

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/128 (46%), Positives = 83/128 (64%)
 Frame = -3

Query: 385 QIEQAPSGSATEDESPSTEAQPSTSVTDIPQVTTEDVPSASAPVTKWTKDHPIDQIIGDQ 206
           ++E  PS S T+DE PST A PS +  ++ +   +D P      T  +KDHPIDQ++GD 
Sbjct: 120 EVEDKPSTS-TQDE-PSTSASPSQAQVEVEEEKAQDPPMPLRIHTALSKDHPIDQVLGDI 177

Query: 205 NIGVQTRSKVSGNFCLYTNFISIIEPKKVEEALQDSSWIEAMQSELSQFERNKVWKLVPR 26
           + GVQTRS+V+ + C + +F+S +EPK V+EAL D  W+ AM  EL+ F RNKVW LV R
Sbjct: 178 SKGVQTRSRVA-SICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVER 236

Query: 25  PSAKTIIG 2
           P    +IG
Sbjct: 237 PRDHNVIG 244


>emb|CAE04852.2| OSJNBa0084K01.24 [Oryza sativa Japonica Group]
          Length = 543

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/128 (46%), Positives = 83/128 (64%)
 Frame = -3

Query: 385 QIEQAPSGSATEDESPSTEAQPSTSVTDIPQVTTEDVPSASAPVTKWTKDHPIDQIIGDQ 206
           ++E  PS S T+DE PST A PS +  ++ +   +D P      T  +KDHPIDQ++GD 
Sbjct: 120 EVEDKPSTS-TQDE-PSTSASPSQAQVEVEEEKAQDPPMPLRIHTALSKDHPIDQVLGDI 177

Query: 205 NIGVQTRSKVSGNFCLYTNFISIIEPKKVEEALQDSSWIEAMQSELSQFERNKVWKLVPR 26
           + GVQTRS+V+ + C + +F+S +EPK V+EAL D  W+ AM  EL+ F RNKVW LV R
Sbjct: 178 SKGVQTRSRVA-SICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVER 236

Query: 25  PSAKTIIG 2
           P    +IG
Sbjct: 237 PRDHNVIG 244


>gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1411

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/128 (46%), Positives = 83/128 (64%)
 Frame = -3

Query: 385  QIEQAPSGSATEDESPSTEAQPSTSVTDIPQVTTEDVPSASAPVTKWTKDHPIDQIIGDQ 206
            ++E  PS S T+DE PST A PS +  ++ +   +D P      T  +KDHPIDQ++GD 
Sbjct: 820  EVEDKPSTS-TQDE-PSTSASPSQAQVEVEEEKAQDPPMPPRIHTALSKDHPIDQVLGDI 877

Query: 205  NIGVQTRSKVSGNFCLYTNFISIIEPKKVEEALQDSSWIEAMQSELSQFERNKVWKLVPR 26
            + GVQTRS+++ + C + +F+S +EPK V+EAL D  W+ AM  EL+ F RNKVW LV R
Sbjct: 878  SKGVQTRSRIA-SICEHYSFVSCLEPKHVDEALCDLDWMNAMHEELNNFARNKVWTLVER 936

Query: 25   PSAKTIIG 2
            P    +IG
Sbjct: 937  PRDHNVIG 944


>gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1128

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/128 (46%), Positives = 82/128 (64%)
 Frame = -3

Query: 385 QIEQAPSGSATEDESPSTEAQPSTSVTDIPQVTTEDVPSASAPVTKWTKDHPIDQIIGDQ 206
           ++E  PS S T+DE PST A PS +  ++ +   +D P      T  +KDHPIDQ++GD 
Sbjct: 535 EVEDKPSTS-TQDE-PSTSASPSQAQVEVEKEKAQDPPMPPRIYTALSKDHPIDQVLGDI 592

Query: 205 NIGVQTRSKVSGNFCLYTNFISIIEPKKVEEALQDSSWIEAMQSELSQFERNKVWKLVPR 26
           + GVQTRS V+ + C + +F+S +EPK V+EAL D  W+ A+  EL+ F RNKVW LV R
Sbjct: 593 SKGVQTRSPVA-SICEHYSFVSCLEPKHVDEALYDPDWMNAIHEELNNFARNKVWTLVER 651

Query: 25  PSAKTIIG 2
           P    +IG
Sbjct: 652 PRDHNVIG 659


>gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1115

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/128 (46%), Positives = 82/128 (64%)
 Frame = -3

Query: 385 QIEQAPSGSATEDESPSTEAQPSTSVTDIPQVTTEDVPSASAPVTKWTKDHPIDQIIGDQ 206
           ++E  PS S T+DE PST A PS +  ++ +   +D P      T  +KDHPIDQ++GD 
Sbjct: 522 EVEDKPSTS-TQDE-PSTSASPSQAQVEVEKEKAQDPPMPPRIYTALSKDHPIDQVLGDI 579

Query: 205 NIGVQTRSKVSGNFCLYTNFISIIEPKKVEEALQDSSWIEAMQSELSQFERNKVWKLVPR 26
           + GVQTRS V+ + C + +F+S +EPK V+EAL D  W+ A+  EL+ F RNKVW LV R
Sbjct: 580 SKGVQTRSPVA-SICEHYSFVSCLEPKHVDEALYDPDWMNAIHEELNNFARNKVWTLVER 638

Query: 25  PSAKTIIG 2
           P    +IG
Sbjct: 639 PRDHNVIG 646


Top