BLASTX nr result

ID: Atractylodes22_contig00036870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036870
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab...    71   3e-10
dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]                       70   5e-10
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    70   5e-10
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    70   5e-10
ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub...    70   8e-10

>ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp.
           lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein
           ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
 Frame = -3

Query: 828 GFGFDPITDDYKIVAMY-TSQNTGVVLNSLVYTTKTGTW---CSIISPTTPFFDVLSWGC 661
           GFGFD  T DYK+V +  TS +   +L++ VY+ K  +W   C +    +  F     G 
Sbjct: 188 GFGFDDHTHDYKVVKLVATSVSNQHILDASVYSLKANSWRRICILNYKGSNAFHTC--GV 245

Query: 660 FVNGVLHWVVNEFVNHPYIMTFDLNTQVFGTIMLPEESRVCIRR-----LTTISDSLAVI 496
             NG +HWV+    +H  I+ FDL T+ F  +  P+E+  C  +     +  ++  L V+
Sbjct: 246 HFNGAIHWVLTRHEDHRVILVFDLTTEEFREMPFPDEAEDCSHKRGEFMVGCLNGRLCVV 305

Query: 495 -FCVDDYSWIWVRKVSANVSSWS-VVCKLEGGPVDGILQLTNCNFLVHTWHDGFLVYNPV 322
             C   +  IWV        SWS +   L    +       N + ++       ++YN  
Sbjct: 306 NHCNGQHDDIWVMNEYGEAKSWSRMRMSLSYWVMRPQCSTKNDDEVLLDVDGDMVLYNFK 365

Query: 321 TGVRSRLMELEGFHMVV---METYVES 250
           T   SR M + GF + V    +TYVES
Sbjct: 366 TDA-SRRMSIRGFKVGVGFEADTYVES 391


>dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]
          Length = 241

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
 Frame = -3

Query: 828 GFGFDPITDDYKIVAMYTSQNTGVVLNSLVYTTKTGTWCSIISPTTPFFD-VLSWGCFVN 652
           GFGFD +TDDYK+V +  +     +L++ VY+ K  +W  I +      D   + G   N
Sbjct: 29  GFGFDGLTDDYKLVKLVATSED--ILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFN 86

Query: 651 GVLHWVVNEF-VNHPYIMTFDLNTQVFGTIMLPEESRVCIRRLT-----TISDSLAVI-F 493
           G +HWV  E   N   ++ FD+ T+ F  + +P+E+  C  R +     +++  L V+  
Sbjct: 87  GAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNS 146

Query: 492 CVDDYSWIWVRKVSANVSSWS 430
           C D +  IWV        SWS
Sbjct: 147 CYDVHDDIWVMSEYGEAKSWS 167


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
           gi|21536665|gb|AAM60997.1| unknown [Arabidopsis
           thaliana]
          Length = 416

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
 Frame = -3

Query: 828 GFGFDPITDDYKIVAMYTSQNTGVVLNSLVYTTKTGTWCSIISPTTPFFD-VLSWGCFVN 652
           GFGFD +TDDYK+V +  +     +L++ VY+ K  +W  I +      D   + G   N
Sbjct: 204 GFGFDGLTDDYKLVKLVATSED--ILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFN 261

Query: 651 GVLHWVVNEF-VNHPYIMTFDLNTQVFGTIMLPEESRVCIRRLT-----TISDSLAVI-F 493
           G +HWV  E   N   ++ FD+ T+ F  + +P+E+  C  R +     +++  L V+  
Sbjct: 262 GAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNS 321

Query: 492 CVDDYSWIWVRKVSANVSSWS 430
           C D +  IWV        SWS
Sbjct: 322 CYDVHDDIWVMSEYGEAKSWS 342


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g06240
           gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
           thaliana] gi|29824145|gb|AAP04033.1| putative F-box
           protein family [Arabidopsis thaliana]
           gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 427

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
 Frame = -3

Query: 828 GFGFDPITDDYKIVAMYTSQNTGVVLNSLVYTTKTGTWCSIISPTTPFFD-VLSWGCFVN 652
           GFGFD +TDDYK+V +  +     +L++ VY+ K  +W  I +      D   + G   N
Sbjct: 215 GFGFDGLTDDYKLVKLVATSED--ILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFN 272

Query: 651 GVLHWVVNEF-VNHPYIMTFDLNTQVFGTIMLPEESRVCIRRLT-----TISDSLAVI-F 493
           G +HWV  E   N   ++ FD+ T+ F  + +P+E+  C  R +     +++  L V+  
Sbjct: 273 GAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNS 332

Query: 492 CVDDYSWIWVRKVSANVSSWS 430
           C D +  IWV        SWS
Sbjct: 333 CYDVHDDIWVMSEYGEAKSWS 353


>ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328297|gb|EFH58716.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
 Frame = -3

Query: 828 GFGFDPITDDYKIVAMYTSQNTGVVLNSLVYTTKTGTWCSIISPTTPFFD-VLSWGCFVN 652
           GFGFD +TDDYK+V +  + +   +L++ VY+ K  +W  I +      D   + G   N
Sbjct: 215 GFGFDDLTDDYKVVKLVATSDD--ILDASVYSLKADSWRRICNLNYEHNDGFYTSGVHFN 272

Query: 651 GVLHWVVNEFVN-HPYIMTFDLNTQVFGTIMLPEESRVCIRRLT-----TISDSLAVI-F 493
           G +HWV  E  +    ++ FD+ T+ F  + LP E+  C  R +     +++  L V+  
Sbjct: 273 GAIHWVFAEISHGQRVVVAFDIQTEEFREMPLPVEAEDCHHRFSNFVVGSLNGRLCVVNS 332

Query: 492 CVDDYSWIWVRKVSANVSSWS 430
           C + +  IWV      V SWS
Sbjct: 333 CYEVHDDIWVMSEYGEVKSWS 353


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