BLASTX nr result

ID: Atractylodes22_contig00036868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036868
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152476.1| PREDICTED: dof zinc finger protein DOF5.6-li...    80   2e-13
ref|XP_002318052.1| f-box family protein [Populus trichocarpa] g...    79   4e-13
ref|XP_002321600.1| f-box family protein [Populus trichocarpa] g...    77   1e-12
ref|XP_003523081.1| PREDICTED: dof zinc finger protein DOF5.6 [G...    75   7e-12
gb|ADL36681.1| DOF domain class transcription factor [Malus x do...    75   7e-12

>ref|XP_004152476.1| PREDICTED: dof zinc finger protein DOF5.6-like [Cucumis sativus]
           gi|449487762|ref|XP_004157788.1| PREDICTED: dof zinc
           finger protein DOF5.6-like [Cucumis sativus]
          Length = 333

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/71 (57%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
 Frame = -1

Query: 197 MGLSSLQASMDSSDWLQVPSSSSGGTEP------MVASSRSSMEKRLRPHQDQALIHCPR 36
           MGL+SLQ  MDSSDWLQ   +   G +       M++ SR   E+RLRP  DQAL  CPR
Sbjct: 1   MGLTSLQVCMDSSDWLQGTMNEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQAL-KCPR 59

Query: 35  CDSTHTKFCYY 3
           CDSTHTKFCYY
Sbjct: 60  CDSTHTKFCYY 70


>ref|XP_002318052.1| f-box family protein [Populus trichocarpa]
           gi|222858725|gb|EEE96272.1| f-box family protein
           [Populus trichocarpa]
          Length = 312

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/71 (57%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
 Frame = -1

Query: 197 MGLSSLQASMDSSDWLQVPSSSSGGTEP------MVASSRSSMEKRLRPHQDQALIHCPR 36
           MGL+SLQ  MDSSDWLQ   +   G +       M+  SR  +E+RLRP  DQAL  CPR
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINDESGMDSSSPSGDMLTCSRPLIERRLRPPHDQAL-KCPR 59

Query: 35  CDSTHTKFCYY 3
           CDSTHTKFCYY
Sbjct: 60  CDSTHTKFCYY 70


>ref|XP_002321600.1| f-box family protein [Populus trichocarpa]
           gi|222868596|gb|EEF05727.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
 Frame = -1

Query: 197 MGLSSLQASMDSSDWLQVPSSSSGGTEP------MVASSRSSMEKRLRPHQDQALIHCPR 36
           MGL+SLQ  MDSSDWLQ   +   G +       M+  SR  +E+RLRP  DQAL  CPR
Sbjct: 1   MGLNSLQVCMDSSDWLQGTINEESGMDSSSPSGDMLTCSRPLIERRLRPPHDQAL-KCPR 59

Query: 35  CDSTHTKFCYY 3
           CDS HTKFCYY
Sbjct: 60  CDSAHTKFCYY 70


>ref|XP_003523081.1| PREDICTED: dof zinc finger protein DOF5.6 [Glycine max]
          Length = 344

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/73 (58%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
 Frame = -1

Query: 197 MGLSSLQASMDSSD-WLQVP-------SSSSGGTEPMVASSRSSMEKRLRPHQDQALIHC 42
           MGLSSL   MDSSD WLQ          SSS  +  M+  SR  +E+RLRP  DQAL  C
Sbjct: 1   MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMIERRLRPPHDQAL-KC 59

Query: 41  PRCDSTHTKFCYY 3
           PRCDSTHTKFCYY
Sbjct: 60  PRCDSTHTKFCYY 72


>gb|ADL36681.1| DOF domain class transcription factor [Malus x domestica]
          Length = 327

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/72 (56%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
 Frame = -1

Query: 197 MGLSSLQASMDSSDWLQVP-------SSSSGGTEPMVASSRSSMEKRLRPHQDQALIHCP 39
           MG +SLQ  MDSSDWLQ          SSS  +  M+  SR  +E+RLRP  +QAL  CP
Sbjct: 1   MGHNSLQVCMDSSDWLQGTIREDSPMDSSSPLSGDMLTCSRPLVERRLRPQHEQAL-KCP 59

Query: 38  RCDSTHTKFCYY 3
           RCDSTHTKFCYY
Sbjct: 60  RCDSTHTKFCYY 71


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