BLASTX nr result

ID: Atractylodes22_contig00036840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036840
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-11
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    41   4e-08
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    41   4e-08
gb|EAY96851.1| hypothetical protein OsI_18772 [Oryza sativa Indi...    45   6e-08
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    40   2e-07

>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 54.3 bits (129), Expect(2) = 2e-11
 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
 Frame = +2

Query: 62  MDKYITKRKRVVDPENKNAEG------SKQSHIHINLNELLADHGLRIKILDYNANIRDE 223
           +DKY  KRK + D E+  A        SK+SHI IN + LLAD GLR  I +Y+ N RD 
Sbjct: 3   LDKYF-KRKSLEDEESIKASSHVTQSSSKKSHIEINPDTLLADPGLRRPIYEYHINDRDA 61

Query: 224 VRRSYLLK 247
           +RR+YL K
Sbjct: 62  IRRAYLQK 69



 Score = 39.3 bits (90), Expect(2) = 2e-11
 Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = +3

Query: 246 KGPCQPRNHEFPYTAFGSKS--RRFNHAWF 329
           KGPCQP + +FP   FG+ S  RRFN AWF
Sbjct: 69  KGPCQPSHCDFPQKQFGNISTLRRFNPAWF 98


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 41.2 bits (95), Expect(2) = 4e-08
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = +3

Query: 246 KGPCQPRNHEFPYTAFGSKSRRFNHAWF 329
           +GPCQPR H+F   A G   RRFN  WF
Sbjct: 90  RGPCQPRGHKFKQIAIGKVLRRFNPKWF 117



 Score = 40.8 bits (94), Expect(2) = 4e-08
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +2

Query: 146 INLNELLADHGLRIKILDYNANIRDEVRRSYLLK 247
           INLNEL +D   R  IL Y+ N RDEVRR YL++
Sbjct: 57  INLNELPSDPAKRKSILSYHPNQRDEVRREYLIR 90


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 41.2 bits (95), Expect(2) = 4e-08
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = +3

Query: 246 KGPCQPRNHEFPYTAFGSKSRRFNHAWF 329
           +GPCQPR H+F   A G   RRFN  WF
Sbjct: 48  RGPCQPRGHKFKQIAIGKVLRRFNPKWF 75



 Score = 40.8 bits (94), Expect(2) = 4e-08
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +2

Query: 146 INLNELLADHGLRIKILDYNANIRDEVRRSYLLK 247
           INLNEL +D   R  IL Y+ N RDEVRR YL++
Sbjct: 15  INLNELPSDPAKRKSILSYHPNQRDEVRREYLIR 48


>gb|EAY96851.1| hypothetical protein OsI_18772 [Oryza sativa Indica Group]
          Length = 758

 Score = 44.7 bits (104), Expect(2) = 6e-08
 Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = +2

Query: 92  VVDPENKNAEGSKQSHIHI--NLNELLADHGLRIKILDYNANIRDEVRRSYLL 244
           V + EN  AE +K+  + I  NL++++AD GLR  I +Y+  IRD+VR  YLL
Sbjct: 18  VAEDENPKAEVAKKPRVGIVLNLDDVVADPGLRRPIEEYDVGIRDQVRTKYLL 70



 Score = 37.0 bits (84), Expect(2) = 6e-08
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +3

Query: 249 GPCQPRNHEFPYTAFGSKSRRFNHAWF 329
           GPCQP  H+FP    G  SR F  AWF
Sbjct: 72  GPCQPAGHKFPRKQQGDGSRSFIEAWF 98


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 40.0 bits (92), Expect(2) = 2e-07
 Identities = 22/63 (34%), Positives = 37/63 (58%)
 Frame = +2

Query: 59  VMDKYITKRKRVVDPENKNAEGSKQSHIHINLNELLADHGLRIKILDYNANIRDEVRRSY 238
           +M+ ++ KR R     + + +GS   H+  NL EL +D G R K+  Y+ N ++ +RR+Y
Sbjct: 113 IMENFL-KRSR-----SSHEQGSSSQHVSCNLEELPSDPGKRPKMSTYHPNDQEIIRRAY 166

Query: 239 LLK 247
           L K
Sbjct: 167 LQK 169



 Score = 40.0 bits (92), Expect(2) = 2e-07
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 246 KGPCQPRNHEFPYTAFGSKSRRFNHAWF 329
           KGPCQP  H FP    G+  RRF  +WF
Sbjct: 169 KGPCQPNQHNFPQRKIGNSMRRFCPSWF 196


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