BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036698
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   272   2e-71
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   172   3e-41
gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               170   1e-40
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc...   168   4e-40
gb|ABF95769.1| retrotransposon protein, putative, Ty1-copia subc...   167   1e-39

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  272 bits (696), Expect = 2e-71
 Identities = 125/138 (90%), Positives = 132/138 (95%)
 Frame = -3

Query: 414 GGEFFDPVYFQSVGIIHETTAPYTPQQNGVAERKNRVLKEMVNSMLSYSGLSEGFWGEAM 235
           GGE++DP YFQSVGIIHETTAPYTPQQNGV ERKNRVLKEMVNSMLSYSGLS+GFWGEAM
Sbjct: 525 GGEYYDPTYFQSVGIIHETTAPYTPQQNGVFERKNRVLKEMVNSMLSYSGLSDGFWGEAM 584

Query: 234 LTACYLLNRVPNKRNKVTPYELWFKKRPNLGYLRVWGCRAVVRLPGPKIKTLGERGIDCI 55
           LTACYLLNRVPNKRNK+TPYELW+KK+PNL YLRVWGCRA+VRLP PKIKTLGERGIDCI
Sbjct: 585 LTACYLLNRVPNKRNKITPYELWYKKKPNLNYLRVWGCRAIVRLPQPKIKTLGERGIDCI 644

Query: 54  FIGYAEHSKAYRFYTIEP 1
           FIGYA HSKAYRFY IEP
Sbjct: 645 FIGYALHSKAYRFYVIEP 662


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/136 (61%), Positives = 102/136 (75%), Gaps = 3/136 (2%)
 Frame = -3

Query: 414  GGEFFDPV---YFQSVGIIHETTAPYTPQQNGVAERKNRVLKEMVNSMLSYSGLSEGFWG 244
            GGE+ D     + +S GIIHE TAPY+PQQNG+AERKNR LKEM+N+ML  SGLS+  WG
Sbjct: 595  GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWG 654

Query: 243  EAMLTACYLLNRVPNKRNKVTPYELWFKKRPNLGYLRVWGCRAVVRLPGPKIKTLGERGI 64
            EA+L+AC++LNR+P+KR   TPYELW    PNL YL+VWGC A V LP  K  T+G +  
Sbjct: 655  EAVLSACFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTF 714

Query: 63   DCIFIGYAEHSKAYRF 16
            DCIFI YA++S AYRF
Sbjct: 715  DCIFIEYAQNSAAYRF 730


>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/129 (60%), Positives = 99/129 (76%)
 Frame = -3

Query: 390 YFQSVGIIHETTAPYTPQQNGVAERKNRVLKEMVNSMLSYSGLSEGFWGEAMLTACYLLN 211
           + +S+GIIHETT PY+P  NGVAERKNR L E+ N+ML  S     FWGEA+LTACY+LN
Sbjct: 577 FVRSLGIIHETTPPYSPSSNGVAERKNRTLVELTNAMLIESHAPLNFWGEAILTACYVLN 636

Query: 210 RVPNKRNKVTPYELWFKKRPNLGYLRVWGCRAVVRLPGPKIKTLGERGIDCIFIGYAEHS 31
           RVP+K++K+TP+ELW   +P+LGYLRVWGC A VRL  PKI  LG++   C F+GYA +S
Sbjct: 637 RVPHKKSKLTPFELWKGYKPSLGYLRVWGCLAFVRLMDPKITKLGKKVTTCAFLGYASNS 696

Query: 30  KAYRFYTIE 4
            AYRF+ +E
Sbjct: 697 TAYRFFNLE 705


>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1075

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/140 (56%), Positives = 101/140 (72%), Gaps = 3/140 (2%)
 Frame = -3

Query: 414 GGEFFD---PVYFQSVGIIHETTAPYTPQQNGVAERKNRVLKEMVNSMLSYSGLSEGFWG 244
           GGE+       + Q  GIIHETT PY+PQ NGVAERKNR L  +VN+MLS SGL    WG
Sbjct: 464 GGEYLSIEFSKFHQEHGIIHETTPPYSPQSNGVAERKNRTLTNLVNAMLSNSGLPNYMWG 523

Query: 243 EAMLTACYLLNRVPNKRNKVTPYELWFKKRPNLGYLRVWGCRAVVRLPGPKIKTLGERGI 64
           EA+ TAC++LNRVP K  +VTPYELW  ++PNL +L+VWGC A V +P  K + LG + +
Sbjct: 524 EALYTACFVLNRVPAKGTEVTPYELWKGRKPNLNFLKVWGCLAKVNIPVVKKRKLGPKTV 583

Query: 63  DCIFIGYAEHSKAYRFYTIE 4
           DC+FIGYA++S AYRF  ++
Sbjct: 584 DCVFIGYAQNSLAYRFLVVK 603


>gb|ABF95769.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 991

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/139 (55%), Positives = 101/139 (72%), Gaps = 3/139 (2%)
 Frame = -3

Query: 414 GGEFFDPVYF---QSVGIIHETTAPYTPQQNGVAERKNRVLKEMVNSMLSYSGLSEGFWG 244
           GGE+F   +    +  GIIHE TAPY+PQ NGVAERKNR L EMVN+ML  +GLS+ +WG
Sbjct: 342 GGEYFSNEFISFCEEYGIIHERTAPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWG 401

Query: 243 EAMLTACYLLNRVPNKRNKVTPYELWFKKRPNLGYLRVWGCRAVVRLPGPKIKTLGERGI 64
           EA+LTAC++LNR+P K  +VTP+E W +K+ NL +LR WGC A V +P  K + LG + +
Sbjct: 402 EAILTACHVLNRIPTKHKEVTPFEEWERKKLNLSHLRTWGCLAKVNVPIAKKRKLGPKTV 461

Query: 63  DCIFIGYAEHSKAYRFYTI 7
           DC+F+GYA HS  YRF  +
Sbjct: 462 DCVFLGYAIHSVGYRFLIV 480