BLASTX nr result

ID: Atractylodes22_contig00036681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036681
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|ABK94828.1| unknown [Populus trichocarpa]                          119   3e-25
ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycin...   116   2e-24
ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like...   116   2e-24
ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like...   116   2e-24

>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/65 (86%), Positives = 64/65 (98%)
 Frame = -3

Query: 210 GVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAICDDIGERSYDVTDVASVLVQM 31
           GVTR L+WVRFGNDLELLDSPGIIPMR+SDQ+AAIKLAICDDIGERSYDVTDVA++LVQ+
Sbjct: 241 GVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAAILVQI 300

Query: 30  LSRLP 16
           L++LP
Sbjct: 301 LTKLP 305


>gb|ABK94828.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/65 (86%), Positives = 64/65 (98%)
 Frame = -3

Query: 210 GVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAICDDIGERSYDVTDVASVLVQM 31
           GVTR L+WVRFGNDLELLDSPGIIPMR+SDQ+AAIKLAICDDIGERSYDVTDVA++LVQ+
Sbjct: 241 GVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAAILVQI 300

Query: 30  LSRLP 16
           L++LP
Sbjct: 301 LTKLP 305


>ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
           gi|255634965|gb|ACU17841.1| unknown [Glycine max]
          Length = 391

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/65 (84%), Positives = 62/65 (95%)
 Frame = -3

Query: 210 GVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAICDDIGERSYDVTDVASVLVQM 31
           GVTR L+WVRFG DLELLDSPGI+PMR+SDQ+AAIKLAICDDIGERSYDV DVA++LVQM
Sbjct: 240 GVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQM 299

Query: 30  LSRLP 16
           LS+LP
Sbjct: 300 LSKLP 304


>ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
           gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome
           biogenesis GTPase A-like [Cucumis sativus]
          Length = 370

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/65 (84%), Positives = 62/65 (95%)
 Frame = -3

Query: 210 GVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAICDDIGERSYDVTDVASVLVQM 31
           GVTR LKWVRFGNDLELLDSPGIIPMR+SDQTAAIKLAICDDIGERSY+  DVA++LVQ+
Sbjct: 243 GVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQI 302

Query: 30  LSRLP 16
           L++LP
Sbjct: 303 LTKLP 307


>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
           gi|296086696|emb|CBI32331.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/65 (84%), Positives = 62/65 (95%)
 Frame = -3

Query: 210 GVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAICDDIGERSYDVTDVASVLVQM 31
           GVTR LKWV+FG DLELLDSPGIIPMR+SDQ+AAIKLAICDDIGERSYDV DVA++LVQM
Sbjct: 241 GVTRQLKWVQFGKDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQM 300

Query: 30  LSRLP 16
           L+R+P
Sbjct: 301 LTRIP 305


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