BLASTX nr result

ID: Atractylodes22_contig00036677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036677
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II tra...    74   1e-11
ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264...    73   3e-11
ref|XP_003526951.1| PREDICTED: uncharacterized protein LOC100816...    71   1e-10
ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|1...    70   2e-10

>ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis]
           gi|223550283|gb|EEF51770.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 196

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/50 (72%), Positives = 45/50 (90%)
 Frame = +3

Query: 342 MEETSSTTIPSQKSTQELAMQGQKHLEDTIESAFQILSSMNDELCNPHLW 491
           ME+T+ +TI   K+TQELAM+GQKHLE+TI++A+QILSSMNDELCNP LW
Sbjct: 1   MEDTTMSTITQSKTTQELAMEGQKHLEETIQAAYQILSSMNDELCNPTLW 50


>ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Cucumis sativus]
           gi|449532651|ref|XP_004173294.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 30-like [Cucumis
           sativus]
          Length = 198

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +3

Query: 342 MEETSSTTIPSQKSTQELAMQGQKHLEDTIESAFQILSSMNDELCNPHLW 491
           MEE S+  +   ++TQELAM+G KHLE+TIESAFQIL SMNDELCNP LW
Sbjct: 1   MEEKSTNVLALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLW 50


>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
           gi|147789866|emb|CAN73869.1| hypothetical protein
           VITISV_001275 [Vitis vinifera]
           gi|297734439|emb|CBI15686.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = +3

Query: 378 KSTQELAMQGQKHLEDTIESAFQILSSMNDELCNPHLW 491
           K+TQELA++GQKHLE+TIESAFQILSSMNDELCNP LW
Sbjct: 7   KATQELALEGQKHLEETIESAFQILSSMNDELCNPTLW 44


>ref|XP_003526951.1| PREDICTED: uncharacterized protein LOC100816835 [Glycine max]
          Length = 168

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = +3

Query: 342 MEETSSTTIPSQKSTQELAMQGQKHLEDTIESAFQILSSMNDELCNPHLW 491
           MEE  S      K+TQELAM+GQK+LE+TIE+AFQILSSMNDELCNP LW
Sbjct: 1   MEEQQS------KTTQELAMEGQKYLEETIENAFQILSSMNDELCNPVLW 44


>ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|118486707|gb|ABK95190.1|
           unknown [Populus trichocarpa]
           gi|222858807|gb|EEE96354.1| predicted protein [Populus
           trichocarpa]
          Length = 185

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = +3

Query: 354 SSTTIPSQKSTQELAMQGQKHLEDTIESAFQILSSMNDELCNPHLW 491
           S  T    K+TQELA++GQKHLE+TI++A+QILSSMNDELCNP LW
Sbjct: 9   SPVTPQHSKTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLW 54


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