BLASTX nr result
ID: Atractylodes22_contig00036675
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00036675 (233 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional ... 62 4e-13 ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional ... 63 1e-12 ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP... 61 1e-12 ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional ... 60 1e-12 dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense] 63 2e-12 >ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like [Glycine max] Length = 402 Score = 61.6 bits (148), Expect(2) = 4e-13 Identities = 27/31 (87%), Positives = 29/31 (93%) Frame = +1 Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231 IFVG LDPNVTD+HLRQVF QYG+LVHVKIP Sbjct: 267 IFVGNLDPNVTDDHLRQVFGQYGELVHVKIP 297 Score = 37.7 bits (86), Expect(2) = 4e-13 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = +2 Query: 2 ASYQNTQGTQNDDDPNNTTV 61 ASYQN QG QN+ DPNNTT+ Sbjct: 248 ASYQNPQGAQNEHDPNNTTI 267 >ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like [Glycine max] Length = 409 Score = 63.2 bits (152), Expect(2) = 1e-12 Identities = 28/31 (90%), Positives = 30/31 (96%) Frame = +1 Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231 IFVG LDPNVTD+HLRQVFSQYG+LVHVKIP Sbjct: 271 IFVGNLDPNVTDDHLRQVFSQYGELVHVKIP 301 Score = 34.7 bits (78), Expect(2) = 1e-12 Identities = 15/22 (68%), Positives = 20/22 (90%), Gaps = 2/22 (9%) Frame = +2 Query: 2 ASYQNTQ--GTQNDDDPNNTTV 61 ASYQN+Q G+QN++DPNNTT+ Sbjct: 250 ASYQNSQPQGSQNENDPNNTTI 271 >ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis sativus] gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis sativus] Length = 408 Score = 61.2 bits (147), Expect(2) = 1e-12 Identities = 28/31 (90%), Positives = 29/31 (93%) Frame = +1 Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231 IFVG LD NVTDEHLRQVFSQYG+LVHVKIP Sbjct: 267 IFVGNLDSNVTDEHLRQVFSQYGELVHVKIP 297 Score = 36.6 bits (83), Expect(2) = 1e-12 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +2 Query: 5 SYQNTQGTQNDDDPNNTTV 61 SYQN GTQN++DPNNTT+ Sbjct: 249 SYQNPPGTQNENDPNNTTI 267 >ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like [Glycine max] Length = 397 Score = 59.7 bits (143), Expect(2) = 1e-12 Identities = 26/31 (83%), Positives = 28/31 (90%) Frame = +1 Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231 IFVG LDPNVTD+HLRQVF YG+LVHVKIP Sbjct: 263 IFVGNLDPNVTDDHLRQVFGHYGELVHVKIP 293 Score = 37.7 bits (86), Expect(2) = 1e-12 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = +2 Query: 2 ASYQNTQGTQNDDDPNNTTV 61 ASYQN QG QN+ DPNNTT+ Sbjct: 244 ASYQNPQGAQNEHDPNNTTI 263 >dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense] Length = 402 Score = 63.2 bits (152), Expect(2) = 2e-12 Identities = 28/31 (90%), Positives = 30/31 (96%) Frame = +1 Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231 IFVG LDPNVTD+HLRQVFSQYG+LVHVKIP Sbjct: 261 IFVGNLDPNVTDDHLRQVFSQYGELVHVKIP 291 Score = 33.9 bits (76), Expect(2) = 2e-12 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = +2 Query: 2 ASYQNTQGTQNDDDPNNTTV 61 ASY NT G Q+++DPNNTT+ Sbjct: 242 ASYSNTPGGQSENDPNNTTI 261