BLASTX nr result

ID: Atractylodes22_contig00036675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036675
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional ...    62   4e-13
ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional ...    63   1e-12
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...    61   1e-12
ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional ...    60   1e-12
dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]      63   2e-12

>ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 402

 Score = 61.6 bits (148), Expect(2) = 4e-13
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +1

Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231
           IFVG LDPNVTD+HLRQVF QYG+LVHVKIP
Sbjct: 267 IFVGNLDPNVTDDHLRQVFGQYGELVHVKIP 297



 Score = 37.7 bits (86), Expect(2) = 4e-13
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 2   ASYQNTQGTQNDDDPNNTTV 61
           ASYQN QG QN+ DPNNTT+
Sbjct: 248 ASYQNPQGAQNEHDPNNTTI 267


>ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 409

 Score = 63.2 bits (152), Expect(2) = 1e-12
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +1

Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231
           IFVG LDPNVTD+HLRQVFSQYG+LVHVKIP
Sbjct: 271 IFVGNLDPNVTDDHLRQVFSQYGELVHVKIP 301



 Score = 34.7 bits (78), Expect(2) = 1e-12
 Identities = 15/22 (68%), Positives = 20/22 (90%), Gaps = 2/22 (9%)
 Frame = +2

Query: 2   ASYQNTQ--GTQNDDDPNNTTV 61
           ASYQN+Q  G+QN++DPNNTT+
Sbjct: 250 ASYQNSQPQGSQNENDPNNTTI 271


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
           sativus] gi|449472157|ref|XP_004153511.1| PREDICTED:
           polyadenylate-binding protein RBP45-like [Cucumis
           sativus]
          Length = 408

 Score = 61.2 bits (147), Expect(2) = 1e-12
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231
           IFVG LD NVTDEHLRQVFSQYG+LVHVKIP
Sbjct: 267 IFVGNLDSNVTDEHLRQVFSQYGELVHVKIP 297



 Score = 36.6 bits (83), Expect(2) = 1e-12
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2

Query: 5   SYQNTQGTQNDDDPNNTTV 61
           SYQN  GTQN++DPNNTT+
Sbjct: 249 SYQNPPGTQNENDPNNTTI 267


>ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 397

 Score = 59.7 bits (143), Expect(2) = 1e-12
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +1

Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231
           IFVG LDPNVTD+HLRQVF  YG+LVHVKIP
Sbjct: 263 IFVGNLDPNVTDDHLRQVFGHYGELVHVKIP 293



 Score = 37.7 bits (86), Expect(2) = 1e-12
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +2

Query: 2   ASYQNTQGTQNDDDPNNTTV 61
           ASYQN QG QN+ DPNNTT+
Sbjct: 244 ASYQNPQGAQNEHDPNNTTI 263


>dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
          Length = 402

 Score = 63.2 bits (152), Expect(2) = 2e-12
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +1

Query: 139 IFVGGLDPNVTDEHLRQVFSQYGQLVHVKIP 231
           IFVG LDPNVTD+HLRQVFSQYG+LVHVKIP
Sbjct: 261 IFVGNLDPNVTDDHLRQVFSQYGELVHVKIP 291



 Score = 33.9 bits (76), Expect(2) = 2e-12
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +2

Query: 2   ASYQNTQGTQNDDDPNNTTV 61
           ASY NT G Q+++DPNNTT+
Sbjct: 242 ASYSNTPGGQSENDPNNTTI 261


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