BLASTX nr result

ID: Atractylodes22_contig00036674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036674
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g...   142   4e-32
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]     142   4e-32
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   140   1e-31
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   139   2e-31
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...   138   5e-31

>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
           gi|255676152|dbj|BAH93014.1| Os05g0235100, partial
           [Oryza sativa Japonica Group]
          Length = 841

 Score =  142 bits (357), Expect = 4e-32
 Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
 Frame = -1

Query: 451 PHSPNHVCRLRNALYGLKQATQAWFEKFLVFIASLGFSSSKTNSSLFVYHHGRXXXXXXX 272
           P +PN VC L+ +LYGLKQA +AW+++F  +I  LGF+SS +N+SLFVY  G        
Sbjct: 460 PSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASNTSLFVYKDGDNIAYLLL 519

Query: 271 XXXXXXXTASSPELVTRVISRLSSEFKMTDLGALSFFLGVAAARSSSGLFLSQSVFAQEI 92
                  TASS  L+  + +RL SEF MTDLG L FFLG++  RSS GLFLSQ  +  ++
Sbjct: 520 YVDDIILTASSATLLHHITARLHSEFAMTDLGDLHFFLGISVTRSSDGLFLSQRQYVVDL 579

Query: 91  LSRAGMDTCNPCSTPAETKSKLPSS-GAPVS 2
           L RAGM  C+  +TP + +SKL ++ GAPVS
Sbjct: 580 LKRAGMSECHSTATPVDARSKLSATDGAPVS 610


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score =  142 bits (357), Expect = 4e-32
 Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
 Frame = -1

Query: 451  PHSPNHVCRLRNALYGLKQATQAWFEKFLVFIASLGFSSSKTNSSLFVYHHGRXXXXXXX 272
            P +PN VC L+ +LYGLKQA +AW+++F  +I  LGF+SS +N+SLFVY  G        
Sbjct: 1099 PSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASNTSLFVYKDGDNIAYLLL 1158

Query: 271  XXXXXXXTASSPELVTRVISRLSSEFKMTDLGALSFFLGVAAARSSSGLFLSQSVFAQEI 92
                   TASS  L+  + +RL SEF MTDLG L FFLG++  RSS GLFLSQ  +  ++
Sbjct: 1159 YVDDIILTASSATLLHHITARLHSEFAMTDLGDLHFFLGISVTRSSDGLFLSQRQYVVDL 1218

Query: 91   LSRAGMDTCNPCSTPAETKSKLPSS-GAPVS 2
            L RAGM  C+  +TP + +SKL ++ GAPVS
Sbjct: 1219 LKRAGMSECHSTATPVDARSKLSATDGAPVS 1249


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 978

 Score =  140 bits (352), Expect = 1e-31
 Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
 Frame = -1

Query: 451  PHSPNHVCRLRNALYGLKQATQAWFEKFLVFIASLGFSSSKTNSSLFVYHHGRXXXXXXX 272
            P +PN VC L+ +LYGLKQA +AW+++F  +I  LGF+SS +++SLFVY  G        
Sbjct: 643  PSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASDTSLFVYKDGDNIAYLLL 702

Query: 271  XXXXXXXTASSPELVTRVISRLSSEFKMTDLGALSFFLGVAAARSSSGLFLSQSVFAQEI 92
                   TASS  L+  + +RL SEF MTDLG L FFLG++  RSS GLFLSQ  +A ++
Sbjct: 703  YVDDIILTASSATLLQHITARLHSEFAMTDLGDLHFFLGISVTRSSDGLFLSQRQYAVDL 762

Query: 91   LSRAGMDTCNPCSTPAETKSKLPSS-GAPVS 2
            L RAGM  C+  +TP +  SKL ++ GAPVS
Sbjct: 763  LKRAGMSECHSTATPIDALSKLSATDGAPVS 793


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/151 (47%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
 Frame = -1

Query: 451  PHSPNHVCRLRNALYGLKQATQAWFEKFLVFIASLGFSSSKTNSSLFVYHHGRXXXXXXX 272
            P +P  VC L+ +LYGLKQA +AW+++F  +I  LGF+SS +++SLF+Y  G        
Sbjct: 731  PSAPTAVCLLQKSLYGLKQAPRAWYQRFATYICQLGFTSSASDTSLFIYKDGDNIAYLLL 790

Query: 271  XXXXXXXTASSPELVTRVISRLSSEFKMTDLGALSFFLGVAAARSSSGLFLSQSVFAQEI 92
                   TASS  L+  + +RL SEF MTDLG L FFLG++  RS+ GLFLSQ  +A ++
Sbjct: 791  YVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFLGISVTRSADGLFLSQRQYAVDL 850

Query: 91   LSRAGMDTCNPCSTPAETKSKLPS-SGAPVS 2
            L RAGM  C+P +TP + + KL +  GAPVS
Sbjct: 851  LRRAGMSECHPTATPVDARCKLSAIDGAPVS 881


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/151 (47%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
 Frame = -1

Query: 451  PHSPNHVCRLRNALYGLKQATQAWFEKFLVFIASLGFSSSKTNSSLFVYHHGRXXXXXXX 272
            P  P  VC L+ +LYGLKQA +AW+++F  +I  LGF+SS +++SLF+Y  G        
Sbjct: 769  PSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASDTSLFIYKDGDNVAYLLL 828

Query: 271  XXXXXXXTASSPELVTRVISRLSSEFKMTDLGALSFFLGVAAARSSSGLFLSQSVFAQEI 92
                   TASS  L+  + +RL SEF MTDLG L FFLG++  RS+ GLFLSQ  +A ++
Sbjct: 829  YVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFLGISVTRSADGLFLSQWQYAVDL 888

Query: 91   LSRAGMDTCNPCSTPAETKSKLPSS-GAPVS 2
            L RAGM  C+P +TP + + KL ++ GAPVS
Sbjct: 889  LRRAGMSECHPTATPVDARCKLSATDGAPVS 919


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